Non-Coding RNA Search

rplac_5916.y1

Sequence:


               
               CCCAGAGTTACCTCAGGAAGTGACAGAAAGTGTGAGGGAGACAGTTGTTCAGCCTAAATC
AGAGCTCCTTGAGTTCAGCGCTGGCTTAGAAAAACTACTGAAGGAAACAATTGCAACCCC
CTGTTCAAGACATGACAGTGATCCCAGGGCTCTTGATTCATCTGAGCTAATAGGTAGTAC
TGAGGTGCCCAGGCAAGCTGCTCCTGCATTCCATCCTAAGGAAGTAAAAGAAACAATAAA
AAAGTCTGAGGCCCCATCCAAAGCTGAGGGTGCTTTTGATATTGGTTTTGAGAAACTCCT
TAAAGAAACATCTAACAGTTGTTCTTATCAGCTCCCAATGTCAGTGAAGGATGAAACTCC
CGAGAAGGAGCTTTCCCAGTCAAGGCAGGCGAGGTGCCTGGGGAAAGTGCCCCCCTTTTC
CTGGACAGCCTCAGGGGCCTCTGGAATGAAGCTCAAGAGTCATGCTTCCCGGTCCCACGT
CAACCAAGGTGGTGAAGAGTTGGGAAGAGACAAAGCTGTGACTGATGGATCCATAGATCT
CTGTGGTTCTGAAAGTGGGATTGAGATCCCTGGCACCGCACAACTGTCTGTGGACCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGAGTTACCTCAGGAAGTGACAGAAAGTGTGAGGGAGACAGTTGTTCAGCCTAAATC
AGAGCTCCTTGAGTTCAGCGCTGGCTTAGAAAAACTACTGAAGGAAACAATTGCAACCCC
CTGTTCAAGACATGACAGTGATCCCAGGGCTCTTGATTCATCTGAGCTAATAGGTAGTAC
TGAGGTGCCCAGGCAAGCTGCTCCTGCATTCCATCCTAAGGAAGTAAAAGAAACAATAAA
AAAGTCTGAGGCCCCATCCAAAGCTGAGGGTGCTTTTGATATTGGTTTTGAGAAACTCCT
TAAAGAAACATCTAACAGTTGTTCTTATCAGCTCCCAATGTCAGTGAAGGATGAAACTCC
CGAGAAGGAGCTTTCCCAGTCAAGGCAGGCGAGGTGCCTGGGGAAAGTGCCCCCCTTTTC
CTGGACAGCCTCAGGGGCCTCTGGAATGAAGCTCAAGAGTCATGCTTCCCGGTCCCACGT
CAACCAAGGTGGTGAAGAGTTGGGAAGAGACAAAGCTGTGACTGATGGATCCATAGATCT
CTGTGGTTCTGAAAGTGGGATTGAGATCCCTGGCACCGCACAACTGTCTGTGGACCATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-599, gnl|bosTau2|chr29 (4414056-4413468)
               

               
               4-599, gnl|Hg17|chr11 (85113630-85113035)
               

               
               4-599, gnl|Mm7|chr7 (86389164-86389756)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-599, gnl|bosTau2|chr29 (4414056-4413468)
               

               
               4-599, gnl|Hg17|chr11 (85113630-85113035)
               

               
               4-599, gnl|Mm7|chr7 (86389164-86389756)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	4-599, gnl\|bosTau2\|chr29 (4414056-4413468)
	4-599, gnl\|Hg17\|chr11 (85113630-85113035)
	4-599, gnl\|Mm7\|chr7 (86389164-86389756)