Non-Coding RNA Search

rplac_5932.y1

Sequence:


               
               GTATCTGGAATTGTAGCAGCAAGAAGTGAACTTTGGTCCCATCTCATCATTTCTTTTTTT
CTACCTGCTTTCCTGTCTCCTTATTTTCCTTCTAGTTTGATGTGAGTGAAGCAATTTCTC
ATTGAACCCCAGGAAGAAGAAGTAGTACAGAAGAGAAAGAATAATAACGGGTCAGCTAGA
CAGAAGATGGGAGTCATCAAACATGTGTCCCAGTAGCCAGACCTATCAACTGAGCACAGG
ACCTTGGGTGGTCTGCTATGATACCACTGAGAGAGTGGGAAGGAAGGGTGCCTGCTTACA
ATCAAGTGAGCATGGAATCACCCTCCCCACTCAGCCTTTGCTGCCATGGAGAGGGTACAA
CTGCGTTTCATGGCATGGTGCTTGTCTGAGGAACTGGAGTCACGCAGGCATTTTTCCTTC
AAGTTTCACCTCATCCACTTCTGAAGGAGCATTATCTGTGCCACTGCTGCATTTTTACAA
AATCTTGTGGGGATTAAGATTATATCAAAGTGCAGAAGGCCAGAGGACTAGAGCCAAAGA
CTTGTTTCAGAAAGATAAGTGATAGTTCTGTGGAAACTCATAAATACAGAGAAATGGTTG
ATTCCAGACCCAGACATAGAATGTTTGAGCAAAGACTCCCATTTGACACTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTATCTGGAATTGTAGCAGCAAGAAGTGAACTTTGGTCCCATCTCATCATTTCTTTTTTT
CTACCTGCTTTCCTGTCTCCTTATTTTCCTTCTAGTTTGATGTGAGTGAAGCAATTTCTC
ATTGAACCCCAGGAAGAAGAAGTAGTACAGAAGAGAAAGAATAATAACGGGTCAGCTAGA
CAGAAGATGGGAGTCATCAAACATGTGTCCCAGTAGCCAGACCTATCAACTGAGCACAGG
ACCTTGGGTGGTCTGCTATGATACCACTGAGAGAGTGGGAAGGAAGGGTGCCTGCTTACA
ATCAAGTGAGCATGGAATCACCCTCCCCACTCAGCCTTTGCTGCCATGGAGAGGGTACAA
CTGCGTTTCATGGCATGGTGCTTGTCTGAGGAACTGGAGTCACGCAGGCATTTTTCCTTC
AAGTTTCACCTCATCCACTTCTGAAGGAGCATTATCTGTGCCACTGCTGCATTTTTACAA
AATCTTGTGGGGATTAAGATTATATCAAAGTGCAGAAGGCCAGAGGACTAGAGCCAAAGA
CTTGTTTCAGAAAGATAAGTGATAGTTCTGTGGAAACTCATAAATACAGAGAAATGGTTG
ATTCCAGACCCAGACATAGAATGTTTGAGCAAAGACTCCCATTTGACACTTTC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-250, gnl|bosTau2|chrX (15290150-15290398)
               

               
               1-250, gnl|Hg17|chrX (101131726-101131479)
               


               
               498-653, gnl|bosTau2|chrX (15483665-15483820)
               

               
               498-653, gnl|Hg17|chrX (100945352-100945197)
               

               
               498-653, gnl|Mm7|chrX (129692632-129692480)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-250, gnl|bosTau2|chrX (15290150-15290398)
               

               
               1-250, gnl|Hg17|chrX (101131726-101131479)
               


               
               498-653, gnl|bosTau2|chrX (15483665-15483820)
               

               
               498-653, gnl|Hg17|chrX (100945352-100945197)
               

               
               498-653, gnl|Mm7|chrX (129692632-129692480)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-250, gnl\|bosTau2\|chrX (15290150-15290398)
	1-250, gnl\|Hg17\|chrX (101131726-101131479)

	498-653, gnl\|bosTau2\|chrX (15483665-15483820)
	498-653, gnl\|Hg17\|chrX (100945352-100945197)
	498-653, gnl\|Mm7\|chrX (129692632-129692480)