Non-Coding RNA Search

rplac_6309.y1

Sequence:


               
               ATACATGGATTTTTTCAACTGGGGTGGGTACTCAGTTTCCCCTAAACTCCTTGGTGTTCA
AGGGTCAGCCGTATAGAGCAAAGTTAAGTCATTGAAAGAGATGTTTCAAAGCAAAGAGAA
TGTAAAGGCATTGGGTTAGAGAGCCAAAATATTCAAGCAGGAGGGCAAGACACACTGGCC
ATGGAAGGTTGAAAGGGGAAAGGAAAGATAGGAAAGAGTCTGAGAGGCCATGACAAAACC
CACCACGTTGGATGAGAACAAAGCATCACTGTTACCCTTAAGCTATCTCGATACTTGGAA
ATTATAGCCTTCAATGTCAGTTTCAGGCATGTAACTCTAATCCCACGAATATGAATCTTA
CCTGCGGAAGATGGTGAAGGGGTTCCCAAAACCCGGAAAACAAAACGTCGGAGAGCAATC
CATAGGTAGCTGATGCCATGAGGTCCCAGCCTTTGCTATTTTCTATCCCTTAAAATGGCT
GCTGGAATGACCGTTGGAAAGGTGGGGAGTGGACAGAATGTTGCCTACTCATCCTGTGGT
TGATCATGCAAGGGAAATAGATGAATTCCATATGCTTCATTTAAAAGGTGTACCTCACTG
ATGGATAACAACTATATCTAACAGGGATATGTTAGATATATGTGATATATGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACATGGATTTTTTCAACTGGGGTGGGTACTCAGTTTCCCCTAAACTCCTTGGTGTTCA
AGGGTCAGCCGTATAGAGCAAAGTTAAGTCATTGAAAGAGATGTTTCAAAGCAAAGAGAA
TGTAAAGGCATTGGGTTAGAGAGCCAAAATATTCAAGCAGGAGGGCAAGACACACTGGCC
ATGGAAGGTTGAAAGGGGAAAGGAAAGATAGGAAAGAGTCTGAGAGGCCATGACAAAACC
CACCACGTTGGATGAGAACAAAGCATCACTGTTACCCTTAAGCTATCTCGATACTTGGAA
ATTATAGCCTTCAATGTCAGTTTCAGGCATGTAACTCTAATCCCACGAATATGAATCTTA
CCTGCGGAAGATGGTGAAGGGGTTCCCAAAACCCGGAAAACAAAACGTCGGAGAGCAATC
CATAGGTAGCTGATGCCATGAGGTCCCAGCCTTTGCTATTTTCTATCCCTTAAAATGGCT
GCTGGAATGACCGTTGGAAAGGTGGGGAGTGGACAGAATGTTGCCTACTCATCCTGTGGT
TGATCATGCAAGGGAAATAGATGAATTCCATATGCTTCATTTAAAAGGTGTACCTCACTG
ATGGATAACAACTATATCTAACAGGGATATGTTAGATATATGTGATATATGTGTG

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               8-154, gnl|bosTau2|chr19 (32739996-32740136)
               


               
               243-590, gnl|bosTau2|chr19 (32740138-32740474)
               

               
               243-590, gnl|Hg17|chr17 (42955552-42955211)
               

               
               243-590, gnl|Mm7|chr11 (97394118-97394430)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-154, gnl|bosTau2|chr19 (32739996-32740136)
               


               
               243-590, gnl|bosTau2|chr19 (32740138-32740474)
               

               
               243-590, gnl|Hg17|chr17 (42955552-42955211)
               

               
               243-590, gnl|Mm7|chr11 (97394118-97394430)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	8-154, gnl\|bosTau2\|chr19 (32739996-32740136)

	243-590, gnl\|bosTau2\|chr19 (32740138-32740474)
	243-590, gnl\|Hg17\|chr17 (42955552-42955211)
	243-590, gnl\|Mm7\|chr11 (97394118-97394430)