rplac_6596.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGTTGGTAACACATGACCATCTAGAAGAA ATCCAGGAGCAAGAGGCAAGAGCGAAAAAGAAGAACAACAGCAAATCCAGTATACAGTGG CGCGGTCTTTGAGCCAGAGCGTAAGAAGAGTGCAGTCACATACCTGAATAGTACAATGCA TCCCGGGACCCGGAAGCGAGGTCGTCCTCCAAAATACAATGCAGTGCTGGGGTTTGGAGC CCTTACCCCAACATCCCCCCCATCCAGTCATCCTGACTCCCCTGAAAATGAAAAGACAGA GACCACATTCACTTTCCCTGCACCTGTCCAGCCTGTGTCCTTGCCCAGCCCCAACTCCAC AGACGGTGATATCCATGAGGATTTTTGCAGCGTGTGCAGAAAAAGCGGCCAGTTGCTGAT GTGTGACACGTGTTCCCGTGTATATCACCTGGACTGCCTAGACCCTCCTCTGAAAACGAT TCCCAAGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGATGCTGAAGAAAGAAGAAGC AATTCCATGGCCCGGAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGTTGGTAACACATGACCATCTAGAAGAA ATCCAGGAGCAAGAGGCAAGAGCGAAAAAGAAGAACAACAGCAAATCCAGTATACAGTGG CGCGGTCTTTGAGCCAGAGCGTAAGAAGAGTGCAGTCACATACCTGAATAGTACAATGCA TCCCGGGACCCGGAAGCGAGGTCGTCCTCCAAAATACAATGCAGTGCTGGGGTTTGGAGC CCTTACCCCAACATCCCCCCCATCCAGTCATCCTGACTCCCCTGAAAATGAAAAGACAGA GACCACATTCACTTTCCCTGCACCTGTCCAGCCTGTGTCCTTGCCCAGCCCCAACTCCAC AGACGGTGATATCCATGAGGATTTTTGCAGCGTGTGCAGAAAAAGCGGCCAGTTGCTGAT GTGTGACACGTGTTCCCGTGTATATCACCTGGACTGCCTAGACCCTCCTCTGAAAACGAT TCCCAAGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGATGCTGAAGAAAGAAGAAGC AATTCCATGGCCCGGAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 199-365, gnl|bosTau2|chr15 (47760640-47760474) | |
| 199-365, gnl|canFam2|chr18 (46516605-46516413) | |
| 199-365, gnl|danRer3|chr16 (50191429-50191643) | |
| 199-365, gnl|dasNov1|scaffold_4877 (42311-42503) | |
| 199-365, gnl|echTel1|scaffold_311183 (72297-72489) | |
| 199-365, gnl|fr1|chrUn (156264663-156264813) | |
| 199-365, gnl|galGal2|chr5 (21166352-21166160) | |
| 199-365, gnl|hg17|chr11 (45923958-45924150) | |
| 199-365, gnl|Hg17|chr11 (45924132-45923966) | |
| 199-365, gnl|loxAfr1|scaffold_5966 (15167-14975) | |
| 199-365, gnl|mm7|chr2 (92202591-92202399) | |
| 199-365, gnl|Mm7|chr2 (92202415-92202581) | |
| 199-365, gnl|monDom2|scaffold_33 (11950482-11950671) | |
| 199-365, gnl|oryCun1|scaffold_204989 (70856-71048) | |
| 199-365, gnl|panTro1|chr9 (46430092-46430284) | |
| 199-365, gnl|rheMac2|chr14 (26187730-26187538) | |
| 199-365, gnl|rn3|chr3 (76645673-76645481) | |
| 199-365, gnl|tetNig1|chr13 (11226912-11227061) | |
| 199-365, gnl|xenTro1|scaffold_76 (1644202-1644392) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 199-365, gnl|bosTau2|chr15 (47760640-47760474) | |
| 199-365, gnl|canFam2|chr18 (46516605-46516413) | |
| 199-365, gnl|danRer3|chr16 (50191429-50191643) | |
| 199-365, gnl|dasNov1|scaffold_4877 (42311-42503) | |
| 199-365, gnl|echTel1|scaffold_311183 (72297-72489) | |
| 199-365, gnl|fr1|chrUn (156264663-156264813) | |
| 199-365, gnl|galGal2|chr5 (21166352-21166160) | |
| 199-365, gnl|hg17|chr11 (45923958-45924150) | |
| 199-365, gnl|Hg17|chr11 (45924132-45923966) | |
| 199-365, gnl|loxAfr1|scaffold_5966 (15167-14975) | |
| 199-365, gnl|mm7|chr2 (92202591-92202399) | |
| 199-365, gnl|Mm7|chr2 (92202415-92202581) | |
| 199-365, gnl|monDom2|scaffold_33 (11950482-11950671) | |
| 199-365, gnl|oryCun1|scaffold_204989 (70856-71048) | |
| 199-365, gnl|panTro1|chr9 (46430092-46430284) | |
| 199-365, gnl|rheMac2|chr14 (26187730-26187538) | |
| 199-365, gnl|rn3|chr3 (76645673-76645481) | |
| 199-365, gnl|tetNig1|chr13 (11226912-11227061) | |
| 199-365, gnl|xenTro1|scaffold_76 (1644202-1644392) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |