rplac_6874.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGAATGTGAAGATGATGTCATTTTAGCATGTCAACCAGAGAATCCAGTTAAAGCATGG ATTTGATATCAGTGCAAGTCGAACGGAACTAGAAGAATTACCTCCGATTGATCATGGCGT TCCTATTACAGACCGAAGAAGTACTTTTCAGGCACACTTGGCCCCAGTAGTTTGTCCCAA ACAGGTGAAAATGGTTCTTGCCAAATTGTATGAGAATAAGAAAATAGCTAGTGCCACCCA CAACATCTACGCATACCGAATATATNGTGAGGATAAACAGACCTTCTTACAGGACTGTGA GGATGATGGGGAAACAGCAGCAGGTGGGCGTCTTCTCCATCTCATGGAGATTCTGAATGT GAAAAATGTCATGGTGGTGGTATCACGCTGGTATGGAGGGATTCTGCTAGGACCAGATCG CTTCAAACATATAAACAACTGTGCCAGAAACATACTAGTGGAGAAGAACTACACAAGTTC ACCAGAGGAATCATCTAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGAATGTGAAGATGATGTCATTTTAGCATGTCAACCAGAGAATCCAGTTAAAGCATGG ATTTGATATCAGTGCAAGTCGAACGGAACTAGAAGAATTACCTCCGATTGATCATGGCGT TCCTATTACAGACCGAAGAAGTACTTTTCAGGCACACTTGGCCCCAGTAGTTTGTCCCAA ACAGGTGAAAATGGTTCTTGCCAAATTGTATGAGAATAAGAAAATAGCTAGTGCCACCCA CAACATCTACGCATACCGAATATATNGTGAGGATAAACAGACCTTCTTACAGGACTGTGA GGATGATGGGGAAACAGCAGCAGGTGGGCGTCTTCTCCATCTCATGGAGATTCTGAATGT GAAAAATGTCATGGTGGTGGTATCACGCTGGTATGGAGGGATTCTGCTAGGACCAGATCG CTTCAAACATATAAACAACTGTGCCAGAAACATACTAGTGGAGAAGAACTACACAAGTTC ACCAGAGGAATCATCTAAG |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 86-189, gnl|bosTau2|chr24 (23469993-23470096) | |
| 86-189, gnl|canFam2|chr29 (11041010-11041115) | |
| 86-189, gnl|canFam2|chr7 (66994187-66994268) | |
| 86-189, gnl|dasNov1|scaffold_49053 (6139-6037) | |
| 86-189, gnl|dasNov1|scaffold_49053 (6044-6137) | |
| 86-189, gnl|echTel1|scaffold_51543 (311-207) | |
| 86-189, gnl|echTel1|scaffold_51543 (214-301) | |
| 86-189, gnl|Hg17|chr18 (20277016-20277119) | |
| 86-189, gnl|hg17|chr5 (78332023-78332115) | |
| 86-189, gnl|hg17|chr8 (57851538-57851641) | |
| 86-189, gnl|loxAfr1|scaffold_12891 (41902-41999) | |
| 86-189, gnl|loxAfr1|scaffold_12891 (41999-41912) | |
| 86-189, gnl|mm7|chr18 (13334911-13335013) | |
| 86-189, gnl|mm7|chr18 (13335008-13334920) | |
| 86-189, gnl|Mm7|chr18 (13334911-13335011) | |
| 86-189, gnl|oryCun1|scaffold_102299 (3328-3434) | |
| 86-189, gnl|oryCun1|scaffold_102299 (3423-3330) | |
| 86-189, gnl|panTro1|chr4 (36884456-36884364) | |
| 86-189, gnl|panTro1|chr7 (59551139-59551242) | |
| 86-189, gnl|rheMac2|chr6 (75228538-75228630) | |
| 86-189, gnl|rheMac2|chr8 (59382858-59382961) | |
| 348-485, gnl|bosTau2|chr24 (23478463-23478600) | |
| 348-485, gnl|canFam2|chr7 (66987771-66987583) | |
| 348-485, gnl|danRer3|chr7 (35512354-35512199) | |
| 348-485, gnl|dasNov1|scaffold_19252 (17977-18167) | |
| 348-485, gnl|echTel1|scaffold_322529 (53055-53346) | |
| 348-485, gnl|fr1|chrUn (154275916-154276072) | |
| 348-485, gnl|galGal2|chr2 (102588065-102588220) | |
| 348-485, gnl|hg17|chr18 (20283757-20283948) | |
| 348-485, gnl|Hg17|chr18 (20283779-20283916) | |
| 348-485, gnl|loxAfr1|scaffold_8606 (8375-8565) | |
| 348-485, gnl|mm7|chr18 (13339415-13339601) | |
| 348-485, gnl|Mm7|chr18 (13339436-13339573) | |
| 348-485, gnl|monDom2|scaffold_21 (39946564-39946787) | |
| 348-485, gnl|oryCun1|scaffold_161371 (20309-20499) | |
| 348-485, gnl|panTro1|chr17 (16209467-16209658) | |
| 348-485, gnl|rheMac2|chr18 (17454491-17454682) | |
| 348-485, gnl|tetNig1|chr1_random (2239548-2239691) | |
| 348-485, gnl|xenTro1|scaffold_1484 (2080-2249) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-189, gnl|bosTau2|chr24 (23469993-23470096) | |
| 86-189, gnl|canFam2|chr29 (11041010-11041115) | |
| 86-189, gnl|canFam2|chr7 (66994187-66994268) | |
| 86-189, gnl|dasNov1|scaffold_49053 (6139-6037) | |
| 86-189, gnl|dasNov1|scaffold_49053 (6044-6137) | |
| 86-189, gnl|echTel1|scaffold_51543 (311-207) | |
| 86-189, gnl|echTel1|scaffold_51543 (214-301) | |
| 86-189, gnl|Hg17|chr18 (20277016-20277119) | |
| 86-189, gnl|hg17|chr5 (78332023-78332115) | |
| 86-189, gnl|hg17|chr8 (57851538-57851641) | |
| 86-189, gnl|loxAfr1|scaffold_12891 (41902-41999) | |
| 86-189, gnl|loxAfr1|scaffold_12891 (41999-41912) | |
| 86-189, gnl|mm7|chr18 (13334911-13335013) | |
| 86-189, gnl|mm7|chr18 (13335008-13334920) | |
| 86-189, gnl|Mm7|chr18 (13334911-13335011) | |
| 86-189, gnl|oryCun1|scaffold_102299 (3328-3434) | |
| 86-189, gnl|oryCun1|scaffold_102299 (3423-3330) | |
| 86-189, gnl|panTro1|chr4 (36884456-36884364) | |
| 86-189, gnl|panTro1|chr7 (59551139-59551242) | |
| 86-189, gnl|rheMac2|chr6 (75228538-75228630) | |
| 86-189, gnl|rheMac2|chr8 (59382858-59382961) | |
| 348-485, gnl|bosTau2|chr24 (23478463-23478600) | |
| 348-485, gnl|canFam2|chr7 (66987771-66987583) | |
| 348-485, gnl|danRer3|chr7 (35512354-35512199) | |
| 348-485, gnl|dasNov1|scaffold_19252 (17977-18167) | |
| 348-485, gnl|echTel1|scaffold_322529 (53055-53346) | |
| 348-485, gnl|fr1|chrUn (154275916-154276072) | |
| 348-485, gnl|galGal2|chr2 (102588065-102588220) | |
| 348-485, gnl|hg17|chr18 (20283757-20283948) | |
| 348-485, gnl|Hg17|chr18 (20283779-20283916) | |
| 348-485, gnl|loxAfr1|scaffold_8606 (8375-8565) | |
| 348-485, gnl|mm7|chr18 (13339415-13339601) | |
| 348-485, gnl|Mm7|chr18 (13339436-13339573) | |
| 348-485, gnl|monDom2|scaffold_21 (39946564-39946787) | |
| 348-485, gnl|oryCun1|scaffold_161371 (20309-20499) | |
| 348-485, gnl|panTro1|chr17 (16209467-16209658) | |
| 348-485, gnl|rheMac2|chr18 (17454491-17454682) | |
| 348-485, gnl|tetNig1|chr1_random (2239548-2239691) | |
| 348-485, gnl|xenTro1|scaffold_1484 (2080-2249) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |