rplac_7052.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGACAAGCAGTCGTGGCAGAGTGAGCGGGAGATCTTCAGCACGCCCGGCATGAAGCAC GAGAACCTGCTACAGTTCATTGCCGCTGAGAAGCGAGGCTCCAACCTGGAGGTGGAGCTG TGGCTCATCACGGCCTTCCACGACAAGGGCTCCCTCACAGATTACCTCAAGGGGAACATC ATCACGTGGAATGAACTGTGTCATGTGGCAGAGACAATGTCAAGAGGCCTCTCGTACCTA CACGAGGACGTGCCCTGGTGCCGTGGCGAGGGCCACAAGCCATCTATTGCCCACAGGGAC TTTAAAAGCAAGAATGTATTGCTGAAGAGTGACCTTACAGCTGTGCTGGCTGACTTTGGC CTGGCTGTTCGGTTTGAGCCAGGGAAACCTCCGGGGGACACTCATGGGCAGGTGGGCACG CGGAGGTACATGGCCCCTGAGGTGCTCGAGGGAGCCATCAACTTCCAGAGAGACGCCTTC CTGCGCATTGACATGTACGCCATGGGGCTAGTGCTGTGGGAGCTCGTGTCCCGCTGCAAG GCTGCCGACGGACCTGTGGACGAGTACATGCTGCCTTTTGAGGAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGACAAGCAGTCGTGGCAGAGTGAGCGGGAGATCTTCAGCACGCCCGGCATGAAGCAC GAGAACCTGCTACAGTTCATTGCCGCTGAGAAGCGAGGCTCCAACCTGGAGGTGGAGCTG TGGCTCATCACGGCCTTCCACGACAAGGGCTCCCTCACAGATTACCTCAAGGGGAACATC ATCACGTGGAATGAACTGTGTCATGTGGCAGAGACAATGTCAAGAGGCCTCTCGTACCTA CACGAGGACGTGCCCTGGTGCCGTGGCGAGGGCCACAAGCCATCTATTGCCCACAGGGAC TTTAAAAGCAAGAATGTATTGCTGAAGAGTGACCTTACAGCTGTGCTGGCTGACTTTGGC CTGGCTGTTCGGTTTGAGCCAGGGAAACCTCCGGGGGACACTCATGGGCAGGTGGGCACG CGGAGGTACATGGCCCCTGAGGTGCTCGAGGGAGCCATCAACTTCCAGAGAGACGCCTTC CTGCGCATTGACATGTACGCCATGGGGCTAGTGCTGTGGGAGCTCGTGTCCCGCTGCAAG GCTGCCGACGGACCTGTGGACGAGTACATGCTGCCTTTTGAGGAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-148, gnl|bosTau2|chr22 (9209201-9209348) | |
| 1-148, gnl|canFam2|chr23 (11223845-11224007) | |
| 1-148, gnl|danRer3|chrUn (152177684-152177835) | |
| 1-148, gnl|dasNov1|scaffold_206398 (391-549) | |
| 1-148, gnl|echTel1|scaffold_282984 (12129-11967) | |
| 1-148, gnl|fr1|chrUn (99531795-99531643) | |
| 1-148, gnl|galGal2|chr2 (5217948-5217788) | |
| 1-148, gnl|hg17|chr3 (38495611-38495773) | |
| 1-148, gnl|Hg17|chr3 (38495620-38495767) | |
| 1-148, gnl|loxAfr1|scaffold_174139 (409-571) | |
| 1-148, gnl|mm7|chr9 (119110057-119110219) | |
| 1-148, gnl|Mm7|chr9 (119110066-119110213) | |
| 1-148, gnl|monDom2|scaffold_5 (52679284-52679439) | |
| 1-148, gnl|oryCun1|scaffold_118673 (3802-3973) | |
| 1-148, gnl|panTro1|chr2 (39598705-39598867) | |
| 1-148, gnl|rheMac2|chr2 (98055544-98055382) | |
| 1-148, gnl|rn3|chr8 (124411795-124411957) | |
| 1-148, gnl|tetNig1|chr15_random (1969330-1969482) | |
| 1-148, gnl|xenTro1|scaffold_657 (519303-519464) | |
| 408-551, gnl|bosTau2|chr22 (9212146-9212289) | |
| 408-551, gnl|canFam2|chr23 (11226995-11227159) | |
| 408-551, gnl|danRer3|chrUn (152185396-152185542) | |
| 408-551, gnl|dasNov1|scaffold_22721 (15888-15743) | |
| 408-551, gnl|echTel1|scaffold_282984 (9400-9236) | |
| 408-551, gnl|fr1|chrUn (99529609-99529441) | |
| 408-551, gnl|galGal2|chr2 (5211070-5210915) | |
| 408-551, gnl|hg17|chr3 (38498668-38498838) | |
| 408-551, gnl|Hg17|chr3 (38498689-38498832) | |
| 408-551, gnl|loxAfr1|scaffold_34021 (3528-3675) | |
| 408-551, gnl|mm7|chr9 (119112671-119112838) | |
| 408-551, gnl|Mm7|chr9 (119112689-119112832) | |
| 408-551, gnl|monDom2|scaffold_5 (52684546-52684716) | |
| 408-551, gnl|oryCun1|scaffold_110720 (16311-16166) | |
| 408-551, gnl|panTro1|chr2 (39601758-39601928) | |
| 408-551, gnl|rheMac2|chr2 (98052499-98052329) | |
| 408-551, gnl|rn3|chr8 (124414388-124414555) | |
| 408-551, gnl|tetNig1|chr15_random (1971257-1971403) | |
| 408-551, gnl|xenTro1|scaffold_657 (526644-526799) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-148, gnl|bosTau2|chr22 (9209201-9209348) | |
| 1-148, gnl|canFam2|chr23 (11223845-11224007) | |
| 1-148, gnl|danRer3|chrUn (152177684-152177835) | |
| 1-148, gnl|dasNov1|scaffold_206398 (391-549) | |
| 1-148, gnl|echTel1|scaffold_282984 (12129-11967) | |
| 1-148, gnl|fr1|chrUn (99531795-99531643) | |
| 1-148, gnl|galGal2|chr2 (5217948-5217788) | |
| 1-148, gnl|hg17|chr3 (38495611-38495773) | |
| 1-148, gnl|Hg17|chr3 (38495620-38495767) | |
| 1-148, gnl|loxAfr1|scaffold_174139 (409-571) | |
| 1-148, gnl|mm7|chr9 (119110057-119110219) | |
| 1-148, gnl|Mm7|chr9 (119110066-119110213) | |
| 1-148, gnl|monDom2|scaffold_5 (52679284-52679439) | |
| 1-148, gnl|oryCun1|scaffold_118673 (3802-3973) | |
| 1-148, gnl|panTro1|chr2 (39598705-39598867) | |
| 1-148, gnl|rheMac2|chr2 (98055544-98055382) | |
| 1-148, gnl|rn3|chr8 (124411795-124411957) | |
| 1-148, gnl|tetNig1|chr15_random (1969330-1969482) | |
| 1-148, gnl|xenTro1|scaffold_657 (519303-519464) | |
| 408-551, gnl|bosTau2|chr22 (9212146-9212289) | |
| 408-551, gnl|canFam2|chr23 (11226995-11227159) | |
| 408-551, gnl|danRer3|chrUn (152185396-152185542) | |
| 408-551, gnl|dasNov1|scaffold_22721 (15888-15743) | |
| 408-551, gnl|echTel1|scaffold_282984 (9400-9236) | |
| 408-551, gnl|fr1|chrUn (99529609-99529441) | |
| 408-551, gnl|galGal2|chr2 (5211070-5210915) | |
| 408-551, gnl|hg17|chr3 (38498668-38498838) | |
| 408-551, gnl|Hg17|chr3 (38498689-38498832) | |
| 408-551, gnl|loxAfr1|scaffold_34021 (3528-3675) | |
| 408-551, gnl|mm7|chr9 (119112671-119112838) | |
| 408-551, gnl|Mm7|chr9 (119112689-119112832) | |
| 408-551, gnl|monDom2|scaffold_5 (52684546-52684716) | |
| 408-551, gnl|oryCun1|scaffold_110720 (16311-16166) | |
| 408-551, gnl|panTro1|chr2 (39601758-39601928) | |
| 408-551, gnl|rheMac2|chr2 (98052499-98052329) | |
| 408-551, gnl|rn3|chr8 (124414388-124414555) | |
| 408-551, gnl|tetNig1|chr15_random (1971257-1971403) | |
| 408-551, gnl|xenTro1|scaffold_657 (526644-526799) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |