rplac_7278.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTATGGCTGCAAAGATGCAGTAGAAGTCTTAATGAAAAATGGCGCTGATGTAACCTTGC TGGATGCCCTTGGTCATGATGTTTTTACTATGCAAGAATTGGCGACAATCTGGATATTCT GACCTTACTGAAGACTGCATCAGAAAATACCAACAGAGCGAAATTTGACACAGATGTTAG ATGAAGTAAATATGAAGTCAAGTCAGAGGGAGCATCAGAACATTCAGGATCTAGAAATTG AAAATGAGGATCTGAAAGAGAGGTTGAGAAAAATTCAGCAAGAACAAAGAATATTATCGG ATAAAGTCAATGGCTTACAACTACAGCTGAATGAGGAGGTAATGGTTGCTGATGATCTGA AAAGTGAGAAAGAAAAGCTGAAGTCCCTTTTGGCAACTAAAGAAAAGCAACAAGAGGAAA GCCTAAGAACTATTGAAGCTCTGAAAAATAGATTCAAGTATTTTGAGGTATAGAAAGCTT AAATAAATTATTTAATAAATTATATAATGGGCAGTGGTAAAGGGCTTGAAGGCACACTTG AATTTGAATTATCACTCTTTTCTTTATAGTGTGACCTCGGGCAATTTATTTAAAGTCTCT GAGCTTGTGCTGCTTCTGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTATGGCTGCAAAGATGCAGTAGAAGTCTTAATGAAAAATGGCGCTGATGTAACCTTGC TGGATGCCCTTGGTCATGATGTTTTTACTATGCAAGAATTGGCGACAATCTGGATATTCT GACCTTACTGAAGACTGCATCAGAAAATACCAACAGAGCGAAATTTGACACAGATGTTAG ATGAAGTAAATATGAAGTCAAGTCAGAGGGAGCATCAGAACATTCAGGATCTAGAAATTG AAAATGAGGATCTGAAAGAGAGGTTGAGAAAAATTCAGCAAGAACAAAGAATATTATCGG ATAAAGTCAATGGCTTACAACTACAGCTGAATGAGGAGGTAATGGTTGCTGATGATCTGA AAAGTGAGAAAGAAAAGCTGAAGTCCCTTTTGGCAACTAAAGAAAAGCAACAAGAGGAAA GCCTAAGAACTATTGAAGCTCTGAAAAATAGATTCAAGTATTTTGAGGTATAGAAAGCTT AAATAAATTATTTAATAAATTATATAATGGGCAGTGGTAAAGGGCTTGAAGGCACACTTG AATTTGAATTATCACTCTTTTCTTTATAGTGTGACCTCGGGCAATTTATTTAAAGTCTCT GAGCTTGTGCTGCTTCTGCAA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-158, gnl|bosTau2|chr10 (12647877-12647719) | |
| 1-158, gnl|Hg17|chr15 (68763816-68763658) | |
| 1-158, gnl|Mm7|chr9 (60881266-60881424) | |
| 226-336, gnl|bosTau2|chr10 (12642817-12642707) | |
| 226-336, gnl|canFam2|chr30 (37394804-37394931) | |
| 226-336, gnl|danRer3|chr7 (26253388-26253266) | |
| 226-336, gnl|dasNov1|scaffold_5259 (25471-25332) | |
| 226-336, gnl|fr1|chrUn (228560788-228560911) | |
| 226-336, gnl|hg17|chr15 (68757491-68757618) | |
| 226-336, gnl|Hg17|chr15 (68757601-68757491) | |
| 226-336, gnl|loxAfr1|scaffold_2422 (58911-58784) | |
| 226-336, gnl|mm7|chr9 (60888089-60887962) | |
| 226-336, gnl|Mm7|chr9 (60887977-60888087) | |
| 226-336, gnl|monDom2|scaffold_12 (40020033-40019905) | |
| 226-336, gnl|oryCun1|scaffold_108558 (3704-3579) | |
| 226-336, gnl|panTro1|chr16 (69390118-69390245) | |
| 226-336, gnl|rheMac2|chr7 (49325166-49325293) | |
| 226-336, gnl|rn3|chr8 (64820072-64819945) | |
| 226-336, gnl|tetNig1|chr5 (10366427-10366313) | |
| 367-621, gnl|bosTau2|chr10 (12641633-12641384) | |
| 367-621, gnl|Hg17|chr15 (68755986-68755735) | |
| 367-621, gnl|Mm7|chr9 (60890525-60890755) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-158, gnl|bosTau2|chr10 (12647877-12647719) | |
| 1-158, gnl|Hg17|chr15 (68763816-68763658) | |
| 1-158, gnl|Mm7|chr9 (60881266-60881424) | |
| 226-336, gnl|bosTau2|chr10 (12642817-12642707) | |
| 226-336, gnl|canFam2|chr30 (37394804-37394931) | |
| 226-336, gnl|danRer3|chr7 (26253388-26253266) | |
| 226-336, gnl|dasNov1|scaffold_5259 (25471-25332) | |
| 226-336, gnl|fr1|chrUn (228560788-228560911) | |
| 226-336, gnl|hg17|chr15 (68757491-68757618) | |
| 226-336, gnl|Hg17|chr15 (68757601-68757491) | |
| 226-336, gnl|loxAfr1|scaffold_2422 (58911-58784) | |
| 226-336, gnl|mm7|chr9 (60888089-60887962) | |
| 226-336, gnl|Mm7|chr9 (60887977-60888087) | |
| 226-336, gnl|monDom2|scaffold_12 (40020033-40019905) | |
| 226-336, gnl|oryCun1|scaffold_108558 (3704-3579) | |
| 226-336, gnl|panTro1|chr16 (69390118-69390245) | |
| 226-336, gnl|rheMac2|chr7 (49325166-49325293) | |
| 226-336, gnl|rn3|chr8 (64820072-64819945) | |
| 226-336, gnl|tetNig1|chr5 (10366427-10366313) | |
| 367-621, gnl|bosTau2|chr10 (12641633-12641384) | |
| 367-621, gnl|Hg17|chr15 (68755986-68755735) | |
| 367-621, gnl|Mm7|chr9 (60890525-60890755) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |