Non-Coding RNA Search

rplac_8369.y1

Sequence:


               
               GAGGAAAATCTCTCATTCTCTTTTGAAGGAGGAATTTAGGGGAAGCTTCTACATTCATTT
ACTTAGTCCCTTCGCTCATTCACTCAGCAAGTATGTACTGGCTACCTGGACTGTACTGGG
CATCCAGGAAGGTGTCTTTCTCTCTATTGAGAGCCTGGCTAGACTGAATAATTAACATCT
CTCCTGGCTTTTTTGGTGGAGGCAACGTTTCTGAGATGCAGAAGCTCACCCCAGAGTCTT
TCTAACAAATCCTTCAGTTCAGGAAAACCTCAGCAGGCCTGATTTTTCCAGCAGTGCGAT
GCTCATTAAACAGAATGAACGGCCGCCCAAGGAGGCCCTGCTATCTGACATGCGAGCGTG
CTGTATTAACTGAACATTTGGGTCACTGTCCTTCTCCGTGTGCTTGCCAGACTTGATGTT
CGTTATAAAAGTTAGGGTGAATTGGAGCGTGAAGGGGCTCCATTTGAACAAACGCTCTAG
CCATTGGCAAAACTCTCTTAGTGATTTTGACATTGTGCTTCATTCTGTTACAGCTTCACT
CCTGGAAATTCCCAGGGCACTGCTGTTACCTGCAGCTGTGCTTGAATTGGGACCCGCTTA
TTCCATCTCTGCCATTCAGAGGCCAGCATCCAAAGCCTGTGGCTGGGTCTGTGCAACCCA
ACCATATCAGGAACATCTCACTGGTCAGGCCCCTTCCTGGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGAAAATCTCTCATTCTCTTTTGAAGGAGGAATTTAGGGGAAGCTTCTACATTCATTT
ACTTAGTCCCTTCGCTCATTCACTCAGCAAGTATGTACTGGCTACCTGGACTGTACTGGG
CATCCAGGAAGGTGTCTTTCTCTCTATTGAGAGCCTGGCTAGACTGAATAATTAACATCT
CTCCTGGCTTTTTTGGTGGAGGCAACGTTTCTGAGATGCAGAAGCTCACCCCAGAGTCTT
TCTAACAAATCCTTCAGTTCAGGAAAACCTCAGCAGGCCTGATTTTTCCAGCAGTGCGAT
GCTCATTAAACAGAATGAACGGCCGCCCAAGGAGGCCCTGCTATCTGACATGCGAGCGTG
CTGTATTAACTGAACATTTGGGTCACTGTCCTTCTCCGTGTGCTTGCCAGACTTGATGTT
CGTTATAAAAGTTAGGGTGAATTGGAGCGTGAAGGGGCTCCATTTGAACAAACGCTCTAG
CCATTGGCAAAACTCTCTTAGTGATTTTGACATTGTGCTTCATTCTGTTACAGCTTCACT
CCTGGAAATTCCCAGGGCACTGCTGTTACCTGCAGCTGTGCTTGAATTGGGACCCGCTTA
TTCCATCTCTGCCATTCAGAGGCCAGCATCCAAAGCCTGTGGCTGGGTCTGTGCAACCCA
ACCATATCAGGAACATCTCACTGGTCAGGCCCCTTCCTGGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-620, gnl|bosTau2|chr15 (39953291-39952679)
               

               
               2-620, gnl|Hg17|chr11 (35161924-35162552)
               

               
               2-620, gnl|Mm7|chr2 (102709668-102709121)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-620, gnl|bosTau2|chr15 (39953291-39952679)
               

               
               2-620, gnl|Hg17|chr11 (35161924-35162552)
               

               
               2-620, gnl|Mm7|chr2 (102709668-102709121)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	2-620, gnl\|bosTau2\|chr15 (39953291-39952679)
	2-620, gnl\|Hg17\|chr11 (35161924-35162552)
	2-620, gnl\|Mm7\|chr2 (102709668-102709121)