Non-Coding RNA Search

rplac_8609.y1

Sequence:


               
               GCCACTGATGAAGATGAAGAGGATGAGGAATCATCAGCTGCAGCTCTGTTTACTAGCGAA
CTTCTTAGGCAAGAACAGGCCAAACTAAATGAAGCAAGAAAGATTTCAGTGGTAAACGTA
AACCCAACCAACATTCGGCCTCATAGCGACACGCCAGAAATCAGAAAATACAAGAAGCGA
TTCAACTCAGAAATACTTTGTGCAGCTCTGTGGGGTGTAAATCTCCTGGTGGGAACCGAA
AATGGCCTGATGCTTTTGGACCGAAGTGGGCAAGGCAAAGTTTATAATCTGATCAACCGG
AGGCGGTTTCAGCAGATGGATGTGCTAGAGGGACTGAATGTCCTCGTGACAATATCAGGA
AAGAAGAATAAGCTACGTGTTTACTATCTTTCATGGTTAAGAAACAGAATACTCCACAAT
GACCCAGAAGTCGAAAAGAAACAAGGCTGGATCACGGTTGGGGACTTGGAAGGCTGTATA
CATTACAAAGTTGTTAAATATGAAAGGATCAAATTCTTGGTGATTGCCTTAAAGAATGCT
GTGGAGATATATGCTTGGGCTCCTAAACCTTATCATAAGTTCATGGCATTTAAGTCTTTT
GCAGATCTCCAGCACAAGCCACTGCTTGTTGATCTCACAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCACTGATGAAGATGAAGAGGATGAGGAATCATCAGCTGCAGCTCTGTTTACTAGCGAA
CTTCTTAGGCAAGAACAGGCCAAACTAAATGAAGCAAGAAAGATTTCAGTGGTAAACGTA
AACCCAACCAACATTCGGCCTCATAGCGACACGCCAGAAATCAGAAAATACAAGAAGCGA
TTCAACTCAGAAATACTTTGTGCAGCTCTGTGGGGTGTAAATCTCCTGGTGGGAACCGAA
AATGGCCTGATGCTTTTGGACCGAAGTGGGCAAGGCAAAGTTTATAATCTGATCAACCGG
AGGCGGTTTCAGCAGATGGATGTGCTAGAGGGACTGAATGTCCTCGTGACAATATCAGGA
AAGAAGAATAAGCTACGTGTTTACTATCTTTCATGGTTAAGAAACAGAATACTCCACAAT
GACCCAGAAGTCGAAAAGAAACAAGGCTGGATCACGGTTGGGGACTTGGAAGGCTGTATA
CATTACAAAGTTGTTAAATATGAAAGGATCAAATTCTTGGTGATTGCCTTAAAGAATGCT
GTGGAGATATATGCTTGGGCTCCTAAACCTTATCATAAGTTCATGGCATTTAAGTCTTTT
GCAGATCTCCAGCACAAGCCACTGCTTGTTGATCTCACAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5EB61_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5EB61_RAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               42-216, gnl|bosTau2|chr1 (61840898-61840724)
               

               
               42-216, gnl|Hg17|chr3 (172284818-172284644)
               

               
               42-216, gnl|Mm7|chr3 (28465734-28465908)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               42-216, gnl|bosTau2|chr1 (61840898-61840724)
               

               
               42-216, gnl|Hg17|chr3 (172284818-172284644)
               

               
               42-216, gnl|Mm7|chr3 (28465734-28465908)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	42-216, gnl\|bosTau2\|chr1 (61840898-61840724)
	42-216, gnl\|Hg17\|chr3 (172284818-172284644)
	42-216, gnl\|Mm7\|chr3 (28465734-28465908)