Non-Coding RNA Search

rplac_8808.y1

Sequence:


               
               CCGGCCTCCCCCCTCGGTCTCGCATGTTTCGTGTTCCTCTCTGAGGCGTGTAGGGGGAGG
CGGTGCACTGCTACCTCTCAGCCCTCACCGCCGCCGGCGGGACCCCCGCCCAGGTTTCTT
TTCTCCCCGGCGCCTTCGGGCGGGGGCGGGAGGAGCAGCCGGAGTCGGGGCGGGGGGCGC
CGGTACCGGCGCCGAGCGGGTGCCACCGCCCTGCGGAGGCTTGTAGACCAGGTGGAAGAT
GAAGGCGTTGCAGTACCAGGGCATGCAGTTGTCGGCTGCTCTGAGGCGAAAGGGAGAGCG
GAAAGGGTTGGGCTGCGGAGGGCTGGTACCCCCGCCTGTAGCCACCGCCATGGTCTGGTC
GTCCATCACACAGCCGTACTCGCTGCTCTCGGTGAAGAAGGCCGGCACTCGGAGGGACTG
CAACCGGGGCAGCGAGCTCAGCCAAGTGTCCTTTAGACCAAAGCCGGAGTTAAATCCGAT
AACCAAGTCGGGTTTGGGCCCCTGCAGCAGGTGGTAGGGCCGCGAAGACACCTTGATCTG
CAGGTCCCTGCGGCCGCAAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGCCTCCCCCCTCGGTCTCGCATGTTTCGTGTTCCTCTCTGAGGCGTGTAGGGGGAGG
CGGTGCACTGCTACCTCTCAGCCCTCACCGCCGCCGGCGGGACCCCCGCCCAGGTTTCTT
TTCTCCCCGGCGCCTTCGGGCGGGGGCGGGAGGAGCAGCCGGAGTCGGGGCGGGGGGCGC
CGGTACCGGCGCCGAGCGGGTGCCACCGCCCTGCGGAGGCTTGTAGACCAGGTGGAAGAT
GAAGGCGTTGCAGTACCAGGGCATGCAGTTGTCGGCTGCTCTGAGGCGAAAGGGAGAGCG
GAAAGGGTTGGGCTGCGGAGGGCTGGTACCCCCGCCTGTAGCCACCGCCATGGTCTGGTC
GTCCATCACACAGCCGTACTCGCTGCTCTCGGTGAAGAAGGCCGGCACTCGGAGGGACTG
CAACCGGGGCAGCGAGCTCAGCCAAGTGTCCTTTAGACCAAAGCCGGAGTTAAATCCGAT
AACCAAGTCGGGTTTGGGCCCCTGCAGCAGGTGGTAGGGCCGCGAAGACACCTTGATCTG
CAGGTCCCTGCGGCCGCAAGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-257, gnl|bosTau2|chr19 (14488752-14489007)
               

               
               1-257, gnl|Hg17|chr17 (4596115-4595862)
               

               
               1-257, gnl|Mm7|chr11 (70547734-70547488)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-257, gnl|bosTau2|chr19 (14488752-14489007)
               

               
               1-257, gnl|Hg17|chr17 (4596115-4595862)
               

               
               1-257, gnl|Mm7|chr11 (70547734-70547488)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-257, gnl\|bosTau2\|chr19 (14488752-14489007)
	1-257, gnl\|Hg17\|chr17 (4596115-4595862)
	1-257, gnl\|Mm7\|chr11 (70547734-70547488)