Non-Coding RNA Search

rplac_8817.y1

Sequence:


               
               GGCACACTTTAGACACTAGCAAGGATAGGGAAAATGTACTGAGGTGCTGGTACTGACGTT
TTTAATGCCATTCCTCGCACCAAGTGTTTTTAACAAACCAAGTGTTTGTATGATTTGGAA
AACTTGCCATTAGAAAATTCCTTTACTACAGATTTGCCCTTTTGCTTTGATTAGAGGTCG
CAAATGAACTTGGCTTTTGTCCTCTCCTTGTACCAGGTCCACAGGGTGTTTTCTCAGGGG
GCGGCTTCTCAGGAAGGGACCGTGAGCCGAGGGGATTTCCTTCTATCAGTCAATGGCACC
TCATTGGCAGGCTTAGCCCACGGGGATGTCTTGAAGGTTCTGCACCAGGCTCAGCTGCAC
AAGGATGTCCTCATGGTCATCAAGAAAGGGAGTGATCAGCCCAGGCCCTCCACCAGGCAG
GAGCCTCCCACAGCCAACGGCAAGGGCTTGATGTCCGGAAAGAGCAGCCCCCTGGAGGCT
GGAATGGGTAAGACAGCAGTTCAGCTGCCTACAGGGGATGAACAGCTGGCGAGAGTTGAT
TCTGGCTGAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCACACTTTAGACACTAGCAAGGATAGGGAAAATGTACTGAGGTGCTGGTACTGACGTT
TTTAATGCCATTCCTCGCACCAAGTGTTTTTAACAAACCAAGTGTTTGTATGATTTGGAA
AACTTGCCATTAGAAAATTCCTTTACTACAGATTTGCCCTTTTGCTTTGATTAGAGGTCG
CAAATGAACTTGGCTTTTGTCCTCTCCTTGTACCAGGTCCACAGGGTGTTTTCTCAGGGG
GCGGCTTCTCAGGAAGGGACCGTGAGCCGAGGGGATTTCCTTCTATCAGTCAATGGCACC
TCATTGGCAGGCTTAGCCCACGGGGATGTCTTGAAGGTTCTGCACCAGGCTCAGCTGCAC
AAGGATGTCCTCATGGTCATCAAGAAAGGGAGTGATCAGCCCAGGCCCTCCACCAGGCAG
GAGCCTCCCACAGCCAACGGCAAGGGCTTGATGTCCGGAAAGAGCAGCCCCCTGGAGGCT
GGAATGGGTAAGACAGCAGTTCAGCTGCCTACAGGGGATGAACAGCTGGCGAGAGTTGAT
TCTGGCTGAACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               177-505, gnl|bosTau2|chr20 (26839303-26838976)
               

               
               177-505, gnl|Hg17|chr5 (32134210-32134516)
               

               
               177-505, gnl|Mm7|chr15 (12428079-12427760)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               177-505, gnl|bosTau2|chr20 (26839303-26838976)
               

               
               177-505, gnl|Hg17|chr5 (32134210-32134516)
               

               
               177-505, gnl|Mm7|chr15 (12428079-12427760)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	177-505, gnl\|bosTau2\|chr20 (26839303-26838976)
	177-505, gnl\|Hg17\|chr5 (32134210-32134516)
	177-505, gnl\|Mm7\|chr15 (12428079-12427760)