Non-Coding RNA Search

rpldo0104_a18.y1

Sequence:


               
               Tggatctggcattgctgtggctgtgttgtaggctggcagctgcagctccaatttgacccc
tagcttgggaacctctatatgctgaggatgcggccctTAAAAAAAAAAAAGAAAAGAATA
AAATTGAACCATTTAAAAAGTGCTGAAGAAGCTTAACTTAAAAAATCCCTTGTGGTAAAT
AAACCTAGTTTGGATCACAGTATTCTGGAATTAAATGGAACATTAGAGACAGTGTCCATC
TTACAGGTGAGGAAAAAGAGTTCCTAAGAGCTCAGGTCTCTAAGAGGAAGAGTGACTTCA
GTGTGAAAATTCTACTACTTAAATGAAAAGACCACTTTCTTTTATTTCTTTTATTTTTTT
TGCTTTTTAGGGCCACACCTGCGGTTTCTAGATTCTTTTTTTCCCCAGATGTATTTATTT
ACTGGGAGACAGGGAGATGAGATGAAATGCTTTAGGGACACCTGTGAGACACCCTTCACT
AGCTTCTTTCTTCACTAGGTGGAAATTCCTAGGAGGTACCTGTTTCATTACATGGGGGCA
GGTTGTGGGCCCCTTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               Tggatctggcattgctgtggctgtgttgtaggctggcagctgcagctccaatttgacccc
tagcttgggaacctctatatgctgaggatgcggccctTAAAAAAAAAAAAGAAAAGAATA
AAATTGAACCATTTAAAAAGTGCTGAAGAAGCTTAACTTAAAAAATCCCTTGTGGTAAAT
AAACCTAGTTTGGATCACAGTATTCTGGAATTAAATGGAACATTAGAGACAGTGTCCATC
TTACAGGTGAGGAAAAAGAGTTCCTAAGAGCTCAGGTCTCTAAGAGGAAGAGTGACTTCA
GTGTGAAAATTCTACTACTTAAATGAAAAGACCACTTTCTTTTATTTCTTTTATTTTTTT
TGCTTTTTAGGGCCACACCTGCGGTTTCTAGATTCTTTTTTTCCCCAGATGTATTTATTT
ACTGGGAGACAGGGAGATGAGATGAAATGCTTTAGGGACACCTGTGAGACACCCTTCACT
AGCTTCTTTCTTCACTAGGTGGAAATTCCTAGGAGGTACCTGTTTCATTACATGGGGGCA
GGTTGTGGGCCCCTTTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               121-347, gnl|bosTau2|chr5 (33403185-33403394)
               


               
               396-556, gnl|bosTau2|chr5 (33403651-33403811)
               

               
               396-556, gnl|Mm7|chr10 (127919781-127919918)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-347, gnl|bosTau2|chr5 (33403185-33403394)
               


               
               396-556, gnl|bosTau2|chr5 (33403651-33403811)
               

               
               396-556, gnl|Mm7|chr10 (127919781-127919918)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	121-347, gnl\|bosTau2\|chr5 (33403185-33403394)

	396-556, gnl\|bosTau2\|chr5 (33403651-33403811)
	396-556, gnl\|Mm7\|chr10 (127919781-127919918)