rpldo0105_c3.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTCACTCTTCAGCTTCGCCGCTGTTTGCAGCCCAGCAGTTTCATCATGTCCTTCAGTGC TGACCAGATTGCTGAATTCAAGGAGGCATTTCTCCTCTTTGACAGAACAGGCGAATGCAA GATCACCCTAAGCCAGGTTGGTGATGTCCTTCGGGCTCTGGGCACAAATCCCACCAATGC AGAGGTCAAGAAGGTTCTGGGAAACCCCAGCAATGAAGAGATGAATGCCAAGAAAATTGA GTTTGAACAATTCCTGCCTATGCTGCAAGCTATTTCCAACAACAAGGACCAGGGAAGCTA TGAAGACTTTGTTGAGGGTCTGCGTGTCTTTGACAAGGAAGGCAATGGTACAGTCATGGG TGCTGAACTTCGTCATGTTCTAGCTACACTAGGTGAAAAGATGAAAGAGGAAGAAGTGGA AGCCCTGATGGCAGGTCAAGAAGACTCCAATGGCTGCATCAACTATGAAGCCTTTGTCAA GCACATCATGTCTATCTAAATAGAGCTCTCAAGATCAAGCACTGCGTTAAGAAGACTGAC TGGAACCTTATTTTAATAATACCCATGACTAACTGTCCAAATCTGTTTACCACCATTCAG GAAAACAAAACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTCACTCTTCAGCTTCGCCGCTGTTTGCAGCCCAGCAGTTTCATCATGTCCTTCAGTGC TGACCAGATTGCTGAATTCAAGGAGGCATTTCTCCTCTTTGACAGAACAGGCGAATGCAA GATCACCCTAAGCCAGGTTGGTGATGTCCTTCGGGCTCTGGGCACAAATCCCACCAATGC AGAGGTCAAGAAGGTTCTGGGAAACCCCAGCAATGAAGAGATGAATGCCAAGAAAATTGA GTTTGAACAATTCCTGCCTATGCTGCAAGCTATTTCCAACAACAAGGACCAGGGAAGCTA TGAAGACTTTGTTGAGGGTCTGCGTGTCTTTGACAAGGAAGGCAATGGTACAGTCATGGG TGCTGAACTTCGTCATGTTCTAGCTACACTAGGTGAAAAGATGAAAGAGGAAGAAGTGGA AGCCCTGATGGCAGGTCAAGAAGACTCCAATGGCTGCATCAACTATGAAGCCTTTGTCAA GCACATCATGTCTATCTAAATAGAGCTCTCAAGATCAAGCACTGCGTTAAGAAGACTGAC TGGAACCTTATTTTAATAATACCCATGACTAACTGTCCAAATCTGTTTACCACCATTCAG GAAAACAAAACAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 69-218, gnl|bosTau2|chr11 (29545857-29546006) | |
| 69-218, gnl|canFam2|chr37 (21149953-21150103) | |
| 69-218, gnl|danRer3|chr3 (15203197-15203041) | |
| 69-218, gnl|dasNov1|scaffold_1304 (78835-78985) | |
| 69-218, gnl|echTel1|scaffold_234945 (8448-8598) | |
| 69-218, gnl|fr1|chrUn (75415780-75415630) | |
| 69-218, gnl|galGal2|chr7 (2721354-2721504) | |
| 69-218, gnl|hg17|chr2 (210988647-210988797) | |
| 69-218, gnl|Hg17|chr2 (210988799-210988650) | |
| 69-218, gnl|loxAfr1|scaffold_6716 (50550-50700) | |
| 69-218, gnl|mm7|chr1 (67169891-67170041) | |
| 69-218, gnl|Mm7|chr1 (67170043-67169894) | |
| 69-218, gnl|monDom2|scaffold_39 (12509896-12509746) | |
| 69-218, gnl|oryCun1|scaffold_175671 (7642-7492) | |
| 69-218, gnl|panTro1|chr13 (101080020-101080170) | |
| 69-218, gnl|rheMac2|chr11 (53218328-53218178) | |
| 69-218, gnl|rn3|chr9 (65869468-65869618) | |
| 69-218, gnl|tetNig1|chr11 (6605815-6605666) | |
| 69-218, gnl|xenTro1|scaffold_1343 (52037-52187) | |
| 512-613, gnl|bosTau2|chr11 (29551863-29551962) | |
| 512-613, gnl|canFam2|chr37 (21143454-21143699) | |
| 512-613, gnl|dasNov1|scaffold_97739 (1061-807) | |
| 512-613, gnl|echTel1|scaffold_234945 (2987-3215) | |
| 512-613, gnl|galGal2|chr7 (2717527-2717758) | |
| 512-613, gnl|hg17|chr2 (210980510-210980763) | |
| 512-613, gnl|Hg17|chr2 (210980699-210980599) | |
| 512-613, gnl|loxAfr1|scaffold_6716 (43842-44094) | |
| 512-613, gnl|mm7|chr1 (67164104-67164337) | |
| 512-613, gnl|Mm7|chr1 (67164269-67164178) | |
| 512-613, gnl|monDom2|scaffold_39 (12522077-12521801) | |
| 512-613, gnl|oryCun1|scaffold_175671 (12086-11827) | |
| 512-613, gnl|panTro1|chr13 (101071933-101072186) | |
| 512-613, gnl|rheMac2|chr12 (74073153-74073402) | |
| 512-613, gnl|rn3|chr9 (65864181-65864411) | |
| 512-613, gnl|xenTro1|scaffold_1343 (50075-50317) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-218, gnl|bosTau2|chr11 (29545857-29546006) | |
| 69-218, gnl|canFam2|chr37 (21149953-21150103) | |
| 69-218, gnl|danRer3|chr3 (15203197-15203041) | |
| 69-218, gnl|dasNov1|scaffold_1304 (78835-78985) | |
| 69-218, gnl|echTel1|scaffold_234945 (8448-8598) | |
| 69-218, gnl|fr1|chrUn (75415780-75415630) | |
| 69-218, gnl|galGal2|chr7 (2721354-2721504) | |
| 69-218, gnl|hg17|chr2 (210988647-210988797) | |
| 69-218, gnl|Hg17|chr2 (210988799-210988650) | |
| 69-218, gnl|loxAfr1|scaffold_6716 (50550-50700) | |
| 69-218, gnl|mm7|chr1 (67169891-67170041) | |
| 69-218, gnl|Mm7|chr1 (67170043-67169894) | |
| 69-218, gnl|monDom2|scaffold_39 (12509896-12509746) | |
| 69-218, gnl|oryCun1|scaffold_175671 (7642-7492) | |
| 69-218, gnl|panTro1|chr13 (101080020-101080170) | |
| 69-218, gnl|rheMac2|chr11 (53218328-53218178) | |
| 69-218, gnl|rn3|chr9 (65869468-65869618) | |
| 69-218, gnl|tetNig1|chr11 (6605815-6605666) | |
| 69-218, gnl|xenTro1|scaffold_1343 (52037-52187) | |
| 512-613, gnl|bosTau2|chr11 (29551863-29551962) | |
| 512-613, gnl|canFam2|chr37 (21143454-21143699) | |
| 512-613, gnl|dasNov1|scaffold_97739 (1061-807) | |
| 512-613, gnl|echTel1|scaffold_234945 (2987-3215) | |
| 512-613, gnl|galGal2|chr7 (2717527-2717758) | |
| 512-613, gnl|hg17|chr2 (210980510-210980763) | |
| 512-613, gnl|Hg17|chr2 (210980699-210980599) | |
| 512-613, gnl|loxAfr1|scaffold_6716 (43842-44094) | |
| 512-613, gnl|mm7|chr1 (67164104-67164337) | |
| 512-613, gnl|Mm7|chr1 (67164269-67164178) | |
| 512-613, gnl|monDom2|scaffold_39 (12522077-12521801) | |
| 512-613, gnl|oryCun1|scaffold_175671 (12086-11827) | |
| 512-613, gnl|panTro1|chr13 (101071933-101072186) | |
| 512-613, gnl|rheMac2|chr12 (74073153-74073402) | |
| 512-613, gnl|rn3|chr9 (65864181-65864411) | |
| 512-613, gnl|xenTro1|scaffold_1343 (50075-50317) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.0970026) |