Non-Coding RNA Search

rpldo0108_a13.y1

Sequence:


               
               TTCAAAGTAGGAACAAACAGCTTCCCAAATTAACTATCTGGAAGGGAGATAGGCAGGCTC
TTACAAGTCGGGTTTTGTTTTGATCAACAAACTTTTGAGACAGTTTTTGTAACCTAGTGT
TTTCATTCCTTGATACTGTCCAGCTATGAAGAGAATCCATAAGCCTAAATTATTCAGGAA
TAGAAGTAATCTGTGTCAGGGAATTGGCTGACTCTCTACAAATAGGTTTTCCGTGATAGT
TATATAATACTGGGCTTGCTTTCTCTTATTCCCTAGCCAGTTTCTCCTCAGGGAATACAA
ATTGATTTTTATATTAGACGAGACACAATTGAGAAAATAATCATAGATAACTGTTGCAGA
TTTTTTTGACTATTCGGATTTACCTGTAAATAGACAGTATACTAAGTTAATATTAGCAAT
GCACCTTCCATTTTTGAACTTAAGATCTTGGAATGTGCCTGCCATAGACACTGCATCCTT
GTCTAGTCACTGGTTAATAAGTTAAATCCTGTTACTGGCTGTGAAATCTCAATATCTCAC
TGCTAGACATGTTCACAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAAAGTAGGAACAAACAGCTTCCCAAATTAACTATCTGGAAGGGAGATAGGCAGGCTC
TTACAAGTCGGGTTTTGTTTTGATCAACAAACTTTTGAGACAGTTTTTGTAACCTAGTGT
TTTCATTCCTTGATACTGTCCAGCTATGAAGAGAATCCATAAGCCTAAATTATTCAGGAA
TAGAAGTAATCTGTGTCAGGGAATTGGCTGACTCTCTACAAATAGGTTTTCCGTGATAGT
TATATAATACTGGGCTTGCTTTCTCTTATTCCCTAGCCAGTTTCTCCTCAGGGAATACAA
ATTGATTTTTATATTAGACGAGACACAATTGAGAAAATAATCATAGATAACTGTTGCAGA
TTTTTTTGACTATTCGGATTTACCTGTAAATAGACAGTATACTAAGTTAATATTAGCAAT
GCACCTTCCATTTTTGAACTTAAGATCTTGGAATGTGCCTGCCATAGACACTGCATCCTT
GTCTAGTCACTGGTTAATAAGTTAAATCCTGTTACTGGCTGTGAAATCTCAATATCTCAC
TGCTAGACATGTTCACAGTT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-209, gnl|bosTau2|chr3 (57866596-57866388)
               

               
               1-209, gnl|Hg17|chr1 (56888637-56888849)
               


               
               212-560, gnl|bosTau2|chr3 (57866358-57866010)
               

               
               212-560, gnl|Hg17|chr1 (56888874-56889228)
               

               
               212-560, gnl|Mm7|chr4 (104409262-104408942)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-209, gnl|bosTau2|chr3 (57866596-57866388)
               

               
               1-209, gnl|Hg17|chr1 (56888637-56888849)
               


               
               212-560, gnl|bosTau2|chr3 (57866358-57866010)
               

               
               212-560, gnl|Hg17|chr1 (56888874-56889228)
               

               
               212-560, gnl|Mm7|chr4 (104409262-104408942)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	1-209, gnl\|bosTau2\|chr3 (57866596-57866388)
	1-209, gnl\|Hg17\|chr1 (56888637-56888849)

	212-560, gnl\|bosTau2\|chr3 (57866358-57866010)
	212-560, gnl\|Hg17\|chr1 (56888874-56889228)
	212-560, gnl\|Mm7\|chr4 (104409262-104408942)