Non-Coding RNA Search

rpldo0113_o13.y1

Sequence:


               
               ctatgccagagccacagcaatgcagcatccgagccgtgtctgcaacctacagcacagctc
atggcaaccctgggtcctcaacccactgagtaaggccagggatcgaacccgcaacctcat
ggttcctagtcgtatttgttaaccactgagccaggacgagaactccTATATCAGTTTTTA
TATAGTGTGTATATTTGTAGAAGGATTTTAGTTTACCATTTTAGGCTATCATATCTGGTT
ATTACTAAATGTCTTGTGTTGTTTCAAGTGTTAGACAAATTCCCTGCAATACATAGTAGA
TATTTAATAAGCTTTCTGTAGGGATTATTGATGAGATCATTTAGAAGGAATGTTTATTCA
AGAGTGGTGTGAATATTGCAAGGAAAAGGAATTTTTCAACTTTTCTGTGATTATTTTTTT
AATAGTCTCATGCAATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ctatgccagagccacagcaatgcagcatccgagccgtgtctgcaacctacagcacagctc
atggcaaccctgggtcctcaacccactgagtaaggccagggatcgaacccgcaacctcat
ggttcctagtcgtatttgttaaccactgagccaggacgagaactccTATATCAGTTTTTA
TATAGTGTGTATATTTGTAGAAGGATTTTAGTTTACCATTTTAGGCTATCATATCTGGTT
ATTACTAAATGTCTTGTGTTGTTTCAAGTGTTAGACAAATTCCCTGCAATACATAGTAGA
TATTTAATAAGCTTTCTGTAGGGATTATTGATGAGATCATTTAGAAGGAATGTTTATTCA
AGAGTGGTGTGAATATTGCAAGGAAAAGGAATTTTTCAACTTTTCTGTGATTATTTTTTT
AATAGTCTCATGCAATCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               175-438, gnl|bosTau2|chr3 (56130250-56129988)
               

               
               175-438, gnl|Hg17|chr1 (62995451-62995713)
               

               
               175-438, gnl|Mm7|chr4 (98612100-98612448)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               175-438, gnl|bosTau2|chr3 (56130250-56129988)
               

               
               175-438, gnl|Hg17|chr1 (62995451-62995713)
               

               
               175-438, gnl|Mm7|chr4 (98612100-98612448)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	175-438, gnl\|bosTau2\|chr3 (56130250-56129988)
	175-438, gnl\|Hg17\|chr1 (62995451-62995713)
	175-438, gnl\|Mm7\|chr4 (98612100-98612448)