Non-Coding RNA Search

rpldo0117_k8.y1

Sequence:


               
               AAAAGTGCAAAGAAAAACAAAACCAAAAACCAGTTTGCTTTCTTACTCCCATCAATTTCT
AGTAAATAGACTTCTGACAAAGGGAGAAAAAATTAGGCCATGAGAAGAGGTCTAGAAAAC
TGAGTCAGACACCCAAATTATTCTTGTTGATCACAGCCTCCAGCCCTTTCTCCCCACACA
CTCCCAAAGTACCTTCCAAGCGGAGATCCTGGCCTGAGTCTGTTTGTACATGGGCTATTT
ATAAGTTGGTTGTAAACTCAAAGGCAAATTTACTCAATGACTTTTAGTCAAGGTCCCTTC
CAGGGTAACCTGGACTCAAAGTCTTTCTGCTGAGGGTCAAGTTGAAATTCATTGTACCTC
ACCAGTAAGATGAATGGTTACTTTGATGAAGAGTAGGATGAACTGTTACTTAGGTTGCAA
TGGACCTTTTTTAAGTCATTTTCACCACTAATTGCCTTTTCTTAAGTGGATCAATATTCA
GAAATTAATTACTGAAGCATTGCTTGAAGAATGCCAAGCATCTTCTATGCTTTGACAATG
CAGTGGTCATCGGCTCGCTGAAAAAATTGCTACTACCATGTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGTGCAAAGAAAAACAAAACCAAAAACCAGTTTGCTTTCTTACTCCCATCAATTTCT
AGTAAATAGACTTCTGACAAAGGGAGAAAAAATTAGGCCATGAGAAGAGGTCTAGAAAAC
TGAGTCAGACACCCAAATTATTCTTGTTGATCACAGCCTCCAGCCCTTTCTCCCCACACA
CTCCCAAAGTACCTTCCAAGCGGAGATCCTGGCCTGAGTCTGTTTGTACATGGGCTATTT
ATAAGTTGGTTGTAAACTCAAAGGCAAATTTACTCAATGACTTTTAGTCAAGGTCCCTTC
CAGGGTAACCTGGACTCAAAGTCTTTCTGCTGAGGGTCAAGTTGAAATTCATTGTACCTC
ACCAGTAAGATGAATGGTTACTTTGATGAAGAGTAGGATGAACTGTTACTTAGGTTGCAA
TGGACCTTTTTTAAGTCATTTTCACCACTAATTGCCTTTTCTTAAGTGGATCAATATTCA
GAAATTAATTACTGAAGCATTGCTTGAAGAATGCCAAGCATCTTCTATGCTTTGACAATG
CAGTGGTCATCGGCTCGCTGAAAAAATTGCTACTACCATGTTTTTTTT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               26-387, gnl|bosTau2|chr28 (17021586-17021218)
               

               
               26-387, gnl|Hg17|chr10 (69649186-69649586)
               


               
               391-585, gnl|bosTau2|chr28 (17021242-17021035)
               

               
               391-585, gnl|Hg17|chr10 (69649563-69649758)
               

               
               391-585, gnl|Mm7|chr10 (62630866-62630684)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-387, gnl|bosTau2|chr28 (17021586-17021218)
               

               
               26-387, gnl|Hg17|chr10 (69649186-69649586)
               


               
               391-585, gnl|bosTau2|chr28 (17021242-17021035)
               

               
               391-585, gnl|Hg17|chr10 (69649563-69649758)
               

               
               391-585, gnl|Mm7|chr10 (62630866-62630684)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	26-387, gnl\|bosTau2\|chr28 (17021586-17021218)
	26-387, gnl\|Hg17\|chr10 (69649186-69649586)

	391-585, gnl\|bosTau2\|chr28 (17021242-17021035)
	391-585, gnl\|Hg17\|chr10 (69649563-69649758)
	391-585, gnl\|Mm7\|chr10 (62630866-62630684)