Non-Coding RNA Search

rpldo0118_i23.y1

Sequence:


               
               CAGATTCTTGTCCTTAAAACTGTCTCCACATCCCTCCCACCATGACCTCCCCCAAGAAAG
AATCACCAAGTCACAAATATAGATAATATAGACAGCAAATAAACATTTCCAAAAAGTAAG
TATTACTAGTAGATGAAGAGATACAAATTAAAATAAGCTACTGTTTCCTCTATTTAAATA
TTTTTGTTTTATTGCAAAAGTGTAGCATATCTTTATTGTAGAAAATAAGGAAATACAAAC
ACAAGAAATCATAGCAACACACAACACAGTTAACATCTCATTGTGTAGCTGTTGTTCTGT
TTTCTGTCTGTGTCTACAATGTATCTAATGGTCTCCTGTTGATGTACACTTGAACCTTGT
TGGTGTAAGTACTGCTGCTATAGTAAACATCCTCTGGGGTGACTTTTTTTTTTTTGCCTT
TCTGATTATTTTGTCAGAACTAGTTCCTGGAGCTGCCTTTATTGAGTCAAAGCATATTGC
ATTTTTAGGGCTTTTCATTATCTTTTGCCAAATTGCTGATCAGAAGGGTTGTATCAAATG
TATGAGAGGATTGGTTTATGCCTTCTCAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGATTCTTGTCCTTAAAACTGTCTCCACATCCCTCCCACCATGACCTCCCCCAAGAAAG
AATCACCAAGTCACAAATATAGATAATATAGACAGCAAATAAACATTTCCAAAAAGTAAG
TATTACTAGTAGATGAAGAGATACAAATTAAAATAAGCTACTGTTTCCTCTATTTAAATA
TTTTTGTTTTATTGCAAAAGTGTAGCATATCTTTATTGTAGAAAATAAGGAAATACAAAC
ACAAGAAATCATAGCAACACACAACACAGTTAACATCTCATTGTGTAGCTGTTGTTCTGT
TTTCTGTCTGTGTCTACAATGTATCTAATGGTCTCCTGTTGATGTACACTTGAACCTTGT
TGGTGTAAGTACTGCTGCTATAGTAAACATCCTCTGGGGTGACTTTTTTTTTTTTGCCTT
TCTGATTATTTTGTCAGAACTAGTTCCTGGAGCTGCCTTTATTGAGTCAAAGCATATTGC
ATTTTTAGGGCTTTTCATTATCTTTTGCCAAATTGCTGATCAGAAGGGTTGTATCAAATG
TATGAGAGGATTGGTTTATGCCTTCTCAAACC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               53-570, gnl|bosTau2|chr29 (12989190-12988667)
               

               
               53-570, gnl|Mm7|chr7 (93085802-93086297)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-570, gnl|bosTau2|chr29 (12989190-12988667)
               

               
               53-570, gnl|Mm7|chr7 (93085802-93086297)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	53-570, gnl\|bosTau2\|chr29 (12989190-12988667)
	53-570, gnl\|Mm7\|chr7 (93085802-93086297)