rpldo0119_p20.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGTCAGAGGTCAATCGTGAGTTAAAAAAACTGCTGGTGGCTTCTGTTGGCGATGACCT TCAGTATCACTTTGAACGTCTAGCCCGTGAGAAAAATCAGCTTATTTTAGAAAATGAAGC CCTAGGTCGAAATGTAGCTCAGCTTTCTGAACAGCTAGAACGTATGTCGATACAGTGTGA CGTGTGGCGAAGTAAATTCCTCGCAAGCAGGGTTATGGCAGATGAGTTAACCAACTCCAG AGCAGTTTTACAGCGTCAGAACCGTGATGCACAGAGTGCTATTCAAGATCTCCTGAGTGA ACGGGAACAGTTTCGTCAGGAAATGATAGCTACCCAGAAATTGTTGGAGGAGCTCTTAGT CTCCTTGCAGTGGGGAAGAGAGCAAACTTACTACCCTAGCGCACAACCTCACAGCACAGC AGAACTAGCATTAACAAATCACAAGTTGGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGTCAGAGGTCAATCGTGAGTTAAAAAAACTGCTGGTGGCTTCTGTTGGCGATGACCT TCAGTATCACTTTGAACGTCTAGCCCGTGAGAAAAATCAGCTTATTTTAGAAAATGAAGC CCTAGGTCGAAATGTAGCTCAGCTTTCTGAACAGCTAGAACGTATGTCGATACAGTGTGA CGTGTGGCGAAGTAAATTCCTCGCAAGCAGGGTTATGGCAGATGAGTTAACCAACTCCAG AGCAGTTTTACAGCGTCAGAACCGTGATGCACAGAGTGCTATTCAAGATCTCCTGAGTGA ACGGGAACAGTTTCGTCAGGAAATGATAGCTACCCAGAAATTGTTGGAGGAGCTCTTAGT CTCCTTGCAGTGGGGAAGAGAGCAAACTTACTACCCTAGCGCACAACCTCACAGCACAGC AGAACTAGCATTAACAAATCACAAGTTGGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 9-211, gnl|bosTau2|chr16 (24791390-24791592) | |
| 9-211, gnl|canFam2|chr7 (32159782-32159978) | |
| 9-211, gnl|danRer3|chrUn (104979224-104979028) | |
| 9-211, gnl|dasNov1|scaffold_44952 (7976-7792) | |
| 9-211, gnl|echTel1|scaffold_221135 (7558-7362) | |
| 9-211, gnl|fr1|chrUn (216090086-216089890) | |
| 9-211, gnl|galGal2|chr1 (77766886-77767082) | |
| 9-211, gnl|Hg17|chr1 (166079224-166079426) | |
| 9-211, gnl|hg17|chr14 (68405149-68405341) | |
| 9-211, gnl|mm7|chr1 (164265818-164266014) | |
| 9-211, gnl|Mm7|chr1 (164266019-164265817) | |
| 9-211, gnl|monDom2|scaffold_16 (20457579-20457383) | |
| 9-211, gnl|oryCun1|scaffold_201801 (126045-126241) | |
| 9-211, gnl|panTro1|chr15 (68071833-68072028) | |
| 9-211, gnl|rheMac2|chr7 (131978100-131978300) | |
| 9-211, gnl|rn3|chr13 (80080364-80080560) | |
| 9-211, gnl|tetNig1|chr5 (8177512-8177708) | |
| 9-211, gnl|xenTro1|scaffold_143 (1707236-1707040) | |
| 341-452, gnl|bosTau2|chr16 (24795911-24796022) | |
| 341-452, gnl|canFam2|chr7 (32154692-32154913) | |
| 341-452, gnl|canFam2|chr7 (32154922-32154692) | |
| 341-452, gnl|danRer3|chrUn (104982013-104981800) | |
| 341-452, gnl|danRer3|chrUn (104981785-104982013) | |
| 341-452, gnl|dasNov1|scaffold_44952 (8325-8105) | |
| 341-452, gnl|dasNov1|scaffold_44952 (8106-8322) | |
| 341-452, gnl|echTel1|scaffold_221135 (7908-7687) | |
| 341-452, gnl|echTel1|scaffold_281184 (43471-43240) | |
| 341-452, gnl|fr1|chrUn (216090901-216090677) | |
| 341-452, gnl|fr1|chrUn (216090667-216090901) | |
| 341-452, gnl|galGal2|chr1 (77764415-77764628) | |
| 341-452, gnl|galGal2|chr1 (77764645-77764414) | |
| 341-452, gnl|hg17|chr1 (166082949-166083180) | |
| 341-452, gnl|Hg17|chr1 (166082959-166083070) | |
| 341-452, gnl|hg17|chr14 (68404511-68404732) | |
| 341-452, gnl|loxAfr1|scaffold_35541 (497-276) | |
| 341-452, gnl|loxAfr1|scaffold_35541 (266-497) | |
| 341-452, gnl|mm7|chr1 (164261982-164262203) | |
| 341-452, gnl|mm7|chr1 (164262213-164261982) | |
| 341-452, gnl|Mm7|chr1 (164262201-164262090) | |
| 341-452, gnl|monDom2|scaffold_16 (20461691-20461471) | |
| 341-452, gnl|monDom2|scaffold_16 (20461465-20461692) | |
| 341-452, gnl|oryCun1|scaffold_201801 (121008-121229) | |
| 341-452, gnl|oryCun1|scaffold_201801 (121239-121008) | |
| 341-452, gnl|panTro1|chr1 (148347496-148347727) | |
| 341-452, gnl|panTro1|chr15 (68071192-68071413) | |
| 341-452, gnl|rheMac2|chr1 (199088228-199088459) | |
| 341-452, gnl|rheMac2|chr7 (131977430-131977651) | |
| 341-452, gnl|rn3|chr13 (80075230-80075451) | |
| 341-452, gnl|rn3|chr13 (80075461-80075230) | |
| 341-452, gnl|tetNig1|chr5 (8176748-8176971) | |
| 341-452, gnl|tetNig1|chr5 (8176985-8176748) | |
| 341-452, gnl|xenTro1|scaffold_143 (1708626-1708405) | |
| 341-452, gnl|xenTro1|scaffold_143 (1708395-1708626) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-211, gnl|bosTau2|chr16 (24791390-24791592) | |
| 9-211, gnl|canFam2|chr7 (32159782-32159978) | |
| 9-211, gnl|danRer3|chrUn (104979224-104979028) | |
| 9-211, gnl|dasNov1|scaffold_44952 (7976-7792) | |
| 9-211, gnl|echTel1|scaffold_221135 (7558-7362) | |
| 9-211, gnl|fr1|chrUn (216090086-216089890) | |
| 9-211, gnl|galGal2|chr1 (77766886-77767082) | |
| 9-211, gnl|Hg17|chr1 (166079224-166079426) | |
| 9-211, gnl|hg17|chr14 (68405149-68405341) | |
| 9-211, gnl|mm7|chr1 (164265818-164266014) | |
| 9-211, gnl|Mm7|chr1 (164266019-164265817) | |
| 9-211, gnl|monDom2|scaffold_16 (20457579-20457383) | |
| 9-211, gnl|oryCun1|scaffold_201801 (126045-126241) | |
| 9-211, gnl|panTro1|chr15 (68071833-68072028) | |
| 9-211, gnl|rheMac2|chr7 (131978100-131978300) | |
| 9-211, gnl|rn3|chr13 (80080364-80080560) | |
| 9-211, gnl|tetNig1|chr5 (8177512-8177708) | |
| 9-211, gnl|xenTro1|scaffold_143 (1707236-1707040) | |
| 341-452, gnl|bosTau2|chr16 (24795911-24796022) | |
| 341-452, gnl|canFam2|chr7 (32154692-32154913) | |
| 341-452, gnl|canFam2|chr7 (32154922-32154692) | |
| 341-452, gnl|danRer3|chrUn (104982013-104981800) | |
| 341-452, gnl|danRer3|chrUn (104981785-104982013) | |
| 341-452, gnl|dasNov1|scaffold_44952 (8325-8105) | |
| 341-452, gnl|dasNov1|scaffold_44952 (8106-8322) | |
| 341-452, gnl|echTel1|scaffold_221135 (7908-7687) | |
| 341-452, gnl|echTel1|scaffold_281184 (43471-43240) | |
| 341-452, gnl|fr1|chrUn (216090901-216090677) | |
| 341-452, gnl|fr1|chrUn (216090667-216090901) | |
| 341-452, gnl|galGal2|chr1 (77764415-77764628) | |
| 341-452, gnl|galGal2|chr1 (77764645-77764414) | |
| 341-452, gnl|hg17|chr1 (166082949-166083180) | |
| 341-452, gnl|Hg17|chr1 (166082959-166083070) | |
| 341-452, gnl|hg17|chr14 (68404511-68404732) | |
| 341-452, gnl|loxAfr1|scaffold_35541 (497-276) | |
| 341-452, gnl|loxAfr1|scaffold_35541 (266-497) | |
| 341-452, gnl|mm7|chr1 (164261982-164262203) | |
| 341-452, gnl|mm7|chr1 (164262213-164261982) | |
| 341-452, gnl|Mm7|chr1 (164262201-164262090) | |
| 341-452, gnl|monDom2|scaffold_16 (20461691-20461471) | |
| 341-452, gnl|monDom2|scaffold_16 (20461465-20461692) | |
| 341-452, gnl|oryCun1|scaffold_201801 (121008-121229) | |
| 341-452, gnl|oryCun1|scaffold_201801 (121239-121008) | |
| 341-452, gnl|panTro1|chr1 (148347496-148347727) | |
| 341-452, gnl|panTro1|chr15 (68071192-68071413) | |
| 341-452, gnl|rheMac2|chr1 (199088228-199088459) | |
| 341-452, gnl|rheMac2|chr7 (131977430-131977651) | |
| 341-452, gnl|rn3|chr13 (80075230-80075451) | |
| 341-452, gnl|rn3|chr13 (80075461-80075230) | |
| 341-452, gnl|tetNig1|chr5 (8176748-8176971) | |
| 341-452, gnl|tetNig1|chr5 (8176985-8176748) | |
| 341-452, gnl|xenTro1|scaffold_143 (1708626-1708405) | |
| 341-452, gnl|xenTro1|scaffold_143 (1708395-1708626) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.0970026) |