Non-Coding RNA Search

rpliv0103_d17.y1

Sequence:


               
               TGTCATTGTAGGCTGAGCCTCCATGATTTGTCTCTTTGAATGCATATTCAGGACTGGCTA
CCATATTTGCTATATTCGGGCCTCATTTTTGTGATGATTTTAAAACTCAGAATGAATGCT
ACCACGTGTGTGATGTCTTGGTGGCAAACATTAAAAAGACTGGATGAAAAATAAACAGCT
GTGGAAGTCAGCATTTGCTGTCAAACCCAAGGGCCACTTCACATTCCTTGGTGAGATAAT
CTGAGATAACAAAGATTCCATTGAGCCTGGAAATTCCATCAGGACATTTTTATTACATCA
TAAGTGAATATTTGTTAAATAAAATTACATCAGGTGAGTGGCACAGTAGGACCAGTAGTT
CTCTTTTAGAACTCTATCCATTTTCCAGTTAAAGAAAACATTTTTTTTTTCTTTTTAGGG
CCACACCTGAGGCATATGGTGCAGCAGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCATTGTAGGCTGAGCCTCCATGATTTGTCTCTTTGAATGCATATTCAGGACTGGCTA
CCATATTTGCTATATTCGGGCCTCATTTTTGTGATGATTTTAAAACTCAGAATGAATGCT
ACCACGTGTGTGATGTCTTGGTGGCAAACATTAAAAAGACTGGATGAAAAATAAACAGCT
GTGGAAGTCAGCATTTGCTGTCAAACCCAAGGGCCACTTCACATTCCTTGGTGAGATAAT
CTGAGATAACAAAGATTCCATTGAGCCTGGAAATTCCATCAGGACATTTTTATTACATCA
TAAGTGAATATTTGTTAAATAAAATTACATCAGGTGAGTGGCACAGTAGGACCAGTAGTT
CTCTTTTAGAACTCTATCCATTTTCCAGTTAAAGAAAACATTTTTTTTTTCTTTTTAGGG
CCACACCTGAGGCATATGGTGCAGCAGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-312, gnl|bosTau2|chr4 (56247542-56247235)
               

               
               1-312, gnl|Hg17|chr7 (134871336-134871635)
               

               
               1-312, gnl|Mm7|chr6 (35240606-35240913)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-312, gnl|bosTau2|chr4 (56247542-56247235)
               

               
               1-312, gnl|Hg17|chr7 (134871336-134871635)
               

               
               1-312, gnl|Mm7|chr6 (35240606-35240913)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-312, gnl\|bosTau2\|chr4 (56247542-56247235)
	1-312, gnl\|Hg17\|chr7 (134871336-134871635)
	1-312, gnl\|Mm7\|chr6 (35240606-35240913)