Non-Coding RNA Search

rpliv0104_e22.y1

Sequence:


               
               ATTTCATTTCTTGTTTTATACATGTGATCTTATAAAGGTTTTTTTTTTCCATTTTCTGAG
ATTTATAGATTGGTGTATAGCTTTAAACTGTATAAACTTTTGTGGAAAGATTTTTTTAAA
CACTTTTATAAATCTTAAAATTGGTATCATCAAAGTGAGCCCATCTTGTGTTTATAAAAT
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCATTTCTTGTTTTATACATGTGATCTTATAAAGGTTTTTTTTTTCCATTTTCTGAG
ATTTATAGATTGGTGTATAGCTTTAAACTGTATAAACTTTTGTGGAAAGATTTTTTTAAA
CACTTTTATAAATCTTAAAATTGGTATCATCAAAGTGAGCCCATCTTGTGTTTATAAAAT
G

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-181, gnl|bosTau2|chr9 (34996030-34995843)
               

               
               1-181, gnl|canFam2|chr12 (49782669-49782982)
               

               
               1-181, gnl|hg17|chr13 (48666883-48667205)
               

               
               1-181, gnl|Hg17|chr6 (88029166-88029357)
               

               
               1-181, gnl|loxAfr1|scaffold_724 (100106-100440)
               

               
               1-181, gnl|mm7|chr4 (34942749-34942436)
               

               
               1-181, gnl|Mm7|chr4 (34942746-34942567)
               

               
               1-181, gnl|monDom2|scaffold_0 (141971456-141971145)
               

               
               1-181, gnl|panTro1|chr14_random (14730191-14730513)
               

               
               1-181, gnl|rheMac2|chr17 (28008814-28009160)
               

               
               1-181, gnl|rn3|chr5 (51439676-51439366)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-181, gnl|bosTau2|chr9 (34996030-34995843)
               

               
               1-181, gnl|canFam2|chr12 (49782669-49782982)
               

               
               1-181, gnl|hg17|chr13 (48666883-48667205)
               

               
               1-181, gnl|Hg17|chr6 (88029166-88029357)
               

               
               1-181, gnl|loxAfr1|scaffold_724 (100106-100440)
               

               
               1-181, gnl|mm7|chr4 (34942749-34942436)
               

               
               1-181, gnl|Mm7|chr4 (34942746-34942567)
               

               
               1-181, gnl|monDom2|scaffold_0 (141971456-141971145)
               

               
               1-181, gnl|panTro1|chr14_random (14730191-14730513)
               

               
               1-181, gnl|rheMac2|chr17 (28008814-28009160)
               

               
               1-181, gnl|rn3|chr5 (51439676-51439366)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-181, gnl\|bosTau2\|chr9 (34996030-34995843)
	1-181, gnl\|canFam2\|chr12 (49782669-49782982)
	1-181, gnl\|hg17\|chr13 (48666883-48667205)
	1-181, gnl\|Hg17\|chr6 (88029166-88029357)
	1-181, gnl\|loxAfr1\|scaffold_724 (100106-100440)
	1-181, gnl\|mm7\|chr4 (34942749-34942436)
	1-181, gnl\|Mm7\|chr4 (34942746-34942567)
	1-181, gnl\|monDom2\|scaffold_0 (141971456-141971145)
	1-181, gnl\|panTro1\|chr14_random (14730191-14730513)
	1-181, gnl\|rheMac2\|chr17 (28008814-28009160)
	1-181, gnl\|rn3\|chr5 (51439676-51439366)