Non-Coding RNA Search

rpliv0104_f3.y1

Sequence:


               
               TATTTGTGGGTGGGGTTATTTTTCATTTTCTTCTATTTTGGCTCTAGTTAGGTTTAAGCT
TGATTATCAAAGGGTTTTTGATAGATTATGAAAAAGATAGGCTGTGTCGGTTGTACAAAG
GGTTTTAAAATCTGAGCACTTAGGTGAAGGGACAAGCGGGTTTACATATTTAAAAAGAAA
GAAAAAGTACTATGTGATATGGTACTAAAATTTTAATCCTGATATAATTCATTTCTCTTA
CATTGAATCCCCAATCATAATTAAGCTGTATACACAGATTAAATTAACAGAAGCATTTCA
CATAAATGTTGGTTTCAGTCATCAACTACCCATGAATTCCTGCCCAAGGATACTTAATCA
GGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTGTGGGTGGGGTTATTTTTCATTTTCTTCTATTTTGGCTCTAGTTAGGTTTAAGCT
TGATTATCAAAGGGTTTTTGATAGATTATGAAAAAGATAGGCTGTGTCGGTTGTACAAAG
GGTTTTAAAATCTGAGCACTTAGGTGAAGGGACAAGCGGGTTTACATATTTAAAAAGAAA
GAAAAAGTACTATGTGATATGGTACTAAAATTTTAATCCTGATATAATTCATTTCTCTTA
CATTGAATCCCCAATCATAATTAAGCTGTATACACAGATTAAATTAACAGAAGCATTTCA
CATAAATGTTGGTTTCAGTCATCAACTACCCATGAATTCCTGCCCAAGGATACTTAATCA
GGA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-363, gnl|bosTau2|chr12 (33858072-33858452)
               

               
               1-363, gnl|canFam2|chr22 (48380120-48380917)
               

               
               1-363, gnl|echTel1|scaffold_68117 (8414-7613)
               

               
               1-363, gnl|galGal2|chr1 (139052468-139051634)
               

               
               1-363, gnl|hg17|chr13 (94077871-94078656)
               

               
               1-363, gnl|Hg17|chr13 (94077978-94078367)
               

               
               1-363, gnl|loxAfr1|scaffold_13259 (8207-7418)
               

               
               1-363, gnl|mm7|chr14 (112565808-112566599)
               

               
               1-363, gnl|Mm7|chr14 (112565920-112566298)
               

               
               1-363, gnl|monDom2|scaffold_11 (58797028-58796217)
               

               
               1-363, gnl|panTro1|chr14 (77107275-77108060)
               

               
               1-363, gnl|rheMac2|chr17 (75034950-75035734)
               

               
               1-363, gnl|rn3|chr15 (102970925-102971717)
               

               
               1-363, gnl|xenTro1|scaffold_486 (683877-684539)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-363, gnl|bosTau2|chr12 (33858072-33858452)
               

               
               1-363, gnl|canFam2|chr22 (48380120-48380917)
               

               
               1-363, gnl|echTel1|scaffold_68117 (8414-7613)
               

               
               1-363, gnl|galGal2|chr1 (139052468-139051634)
               

               
               1-363, gnl|hg17|chr13 (94077871-94078656)
               

               
               1-363, gnl|Hg17|chr13 (94077978-94078367)
               

               
               1-363, gnl|loxAfr1|scaffold_13259 (8207-7418)
               

               
               1-363, gnl|mm7|chr14 (112565808-112566599)
               

               
               1-363, gnl|Mm7|chr14 (112565920-112566298)
               

               
               1-363, gnl|monDom2|scaffold_11 (58797028-58796217)
               

               
               1-363, gnl|panTro1|chr14 (77107275-77108060)
               

               
               1-363, gnl|rheMac2|chr17 (75034950-75035734)
               

               
               1-363, gnl|rn3|chr15 (102970925-102971717)
               

               
               1-363, gnl|xenTro1|scaffold_486 (683877-684539)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-363, gnl\|bosTau2\|chr12 (33858072-33858452)
	1-363, gnl\|canFam2\|chr22 (48380120-48380917)
	1-363, gnl\|echTel1\|scaffold_68117 (8414-7613)
	1-363, gnl\|galGal2\|chr1 (139052468-139051634)
	1-363, gnl\|hg17\|chr13 (94077871-94078656)
	1-363, gnl\|Hg17\|chr13 (94077978-94078367)
	1-363, gnl\|loxAfr1\|scaffold_13259 (8207-7418)
	1-363, gnl\|mm7\|chr14 (112565808-112566599)
	1-363, gnl\|Mm7\|chr14 (112565920-112566298)
	1-363, gnl\|monDom2\|scaffold_11 (58797028-58796217)
	1-363, gnl\|panTro1\|chr14 (77107275-77108060)
	1-363, gnl\|rheMac2\|chr17 (75034950-75035734)
	1-363, gnl\|rn3\|chr15 (102970925-102971717)
	1-363, gnl\|xenTro1\|scaffold_486 (683877-684539)