Non-Coding RNA Search

rpliv0105_f18.y1

Sequence:


               
               TGTGTTCCCAAATCAGACTACTTTCCATCTTTATAATTGTTTTAGGTTTGCTCTGATTTC
TTTGGTGCGACTTCTCTAGCACCCAAAGTATGGTGTATACAACCTAAAGAAAGTGATGGA
CAAGTGAAGGGATTGATGTGAAAATCTGCTTTCTTTTGATAATGTTTTTTAGATACAAAA
GATGTATAAAAGATATTCTATATGAATATAGAATATCTTACTTAATATTTCACTTTTTGT
CTGCTTTGTAGGACTTAAGCATGACAGTTATTAACGAAATAAAGGGAAGTTCAAATACAC
TTGTAACAATATGTTGTGTAGCTATTGCCTGGGGACATTGTGTTCCTTGAAATTTTTGTT
ATTAGCTTTGTCATTCATTTATAATAGGTTAGGTGTTAGCATTTTCAAGTCTTTTCTTTT
TTGGTGCATCTAGCTTAAGATATTTTATTTTAGAGCTTATAAGTGTAAGTGAATGAAACT
ATGACAATTTTATGCTGCAAGTGATTTTCCTTTAATATGTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGTTCCCAAATCAGACTACTTTCCATCTTTATAATTGTTTTAGGTTTGCTCTGATTTC
TTTGGTGCGACTTCTCTAGCACCCAAAGTATGGTGTATACAACCTAAAGAAAGTGATGGA
CAAGTGAAGGGATTGATGTGAAAATCTGCTTTCTTTTGATAATGTTTTTTAGATACAAAA
GATGTATAAAAGATATTCTATATGAATATAGAATATCTTACTTAATATTTCACTTTTTGT
CTGCTTTGTAGGACTTAAGCATGACAGTTATTAACGAAATAAAGGGAAGTTCAAATACAC
TTGTAACAATATGTTGTGTAGCTATTGCCTGGGGACATTGTGTTCCTTGAAATTTTTGTT
ATTAGCTTTGTCATTCATTTATAATAGGTTAGGTGTTAGCATTTTCAAGTCTTTTCTTTT
TTGGTGCATCTAGCTTAAGATATTTTATTTTAGAGCTTATAAGTGTAAGTGAATGAAACT
ATGACAATTTTATGCTGCAAGTGATTTTCCTTTAATATGTGCTG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               101-360, gnl|bosTau2|chr29 (4952399-4952153)
               

               
               101-360, gnl|Hg17|chr11 (85403330-85403097)
               

               
               101-360, gnl|Mm7|chr7 (86176321-86176528)
               


               
               388-524, gnl|bosTau2|chr29 (4951815-4951676)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-360, gnl|bosTau2|chr29 (4952399-4952153)
               

               
               101-360, gnl|Hg17|chr11 (85403330-85403097)
               

               
               101-360, gnl|Mm7|chr7 (86176321-86176528)
               


               
               388-524, gnl|bosTau2|chr29 (4951815-4951676)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	101-360, gnl\|bosTau2\|chr29 (4952399-4952153)
	101-360, gnl\|Hg17\|chr11 (85403330-85403097)
	101-360, gnl\|Mm7\|chr7 (86176321-86176528)

	388-524, gnl\|bosTau2\|chr29 (4951815-4951676)