Non-Coding RNA Search

rpliv0106_l2.y1

Sequence:


               
               TTGAGTGGTGAGTCCACAGCTCTAACCAAGGAAGAAGAAAAGAAACAGCCAGATGAAGAA
CCTATGGACATGGTTGTGGAAAAACAGGAAGAAACAGACCACAAAAATGACAATCAAATA
CTAACTGAAATTGTTGAAGCTAAAATGGCAGAGGAATTGAAACCAATGGATACTGATAAA
GAGAGCATAGCGGAGTCAAAATCCCCAGAGATGTCTATGCAAGAAGATTGCATTAATGAT
ATTGCCCCTATGCAGACTGATGAACAGACAAACAAAGAGCAGTTTGTACCTGGTCCAAAT
GAAAAACCTTTGTATACTGCAGAACCAGTTACTCTGGAGGATTTACAGTTACTTGCTGAC
CTATTCTACCTTCCTTATGAGCATGGACCCAAAGGAGCACAGATGTTACGAGAGTTCCAG
TGGCTTCGAGCAAATAGCAGTGTTGTCAGTGTCAACTGCAAAGGAAAAGACTCTGAAAAA
ATTGAAGAATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTGTGGACTAGTGATGGGA
ATGTTCACTCGGCTCTCCAATTGTGCCAACAGGACAATCCTTTATGACATGTACTCCTAT
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAGTGGTGAGTCCACAGCTCTAACCAAGGAAGAAGAAAAGAAACAGCCAGATGAAGAA
CCTATGGACATGGTTGTGGAAAAACAGGAAGAAACAGACCACAAAAATGACAATCAAATA
CTAACTGAAATTGTTGAAGCTAAAATGGCAGAGGAATTGAAACCAATGGATACTGATAAA
GAGAGCATAGCGGAGTCAAAATCCCCAGAGATGTCTATGCAAGAAGATTGCATTAATGAT
ATTGCCCCTATGCAGACTGATGAACAGACAAACAAAGAGCAGTTTGTACCTGGTCCAAAT
GAAAAACCTTTGTATACTGCAGAACCAGTTACTCTGGAGGATTTACAGTTACTTGCTGAC
CTATTCTACCTTCCTTATGAGCATGGACCCAAAGGAGCACAGATGTTACGAGAGTTCCAG
TGGCTTCGAGCAAATAGCAGTGTTGTCAGTGTCAACTGCAAAGGAAAAGACTCTGAAAAA
ATTGAAGAATGGCGGTCACGAGCAGCCAAGTTTGAAGAGATGTGTGGACTAGTGATGGGA
ATGTTCACTCGGCTCTCCAATTGTGCCAACAGGACAATCCTTTATGACATGTACTCCTAT
G

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr26 (16663530-16663051)
               

               
               1-480, gnl|Hg17|chr10 (103549068-103548589)
               

               
               1-480, gnl|Mm7|chr19 (45664776-45664297)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr26 (16663530-16663051)
               

               
               1-480, gnl|Hg17|chr10 (103549068-103548589)
               

               
               1-480, gnl|Mm7|chr19 (45664776-45664297)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-480, gnl\|bosTau2\|chr26 (16663530-16663051)
	1-480, gnl\|Hg17\|chr10 (103549068-103548589)
	1-480, gnl\|Mm7\|chr19 (45664776-45664297)