Non-Coding RNA Search

rpliv0108_e4.y1

Sequence:


               
               TTTTAAAAGATAATATTCACCTTCTGCGTGTTTGAAGTTCTCAGGTGCATCAGATCCCTA
CCCTCAACTCTAACAAAATATTGTGAAAAATAAATTATATATGAATTGCTAAACAAGGTA
CCGTGGGGGAATATGAAAAGCAAAAGAGTGGCATTTTAGGTCAAAGAGCTGAAAGTCTAT
TTATAAAGATAAGATAAAAGGAAAAACACACTAGACTAGACAGTAGAGCATTAGGCCAAC
ATGGGGGCTCTGGACAGTTTATATGAATAAATAAAACATTGGCCTGGAAAGTGGCAAGAT
CAACTAAGATTAAAAACAGGTAGTCCAAGGAAAGATTTTAAGTGGTTTTCAAAATAAATT
AGACAACTATTAGCAATAGTATCAGGCCAGCCAAACTAACATGCGTTAGTTGGCAGTCTC
AAGAAAAAAATGTTAAACCCGTTGAAGCAAGAAGTAGAGGAACAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAAAAGATAATATTCACCTTCTGCGTGTTTGAAGTTCTCAGGTGCATCAGATCCCTA
CCCTCAACTCTAACAAAATATTGTGAAAAATAAATTATATATGAATTGCTAAACAAGGTA
CCGTGGGGGAATATGAAAAGCAAAAGAGTGGCATTTTAGGTCAAAGAGCTGAAAGTCTAT
TTATAAAGATAAGATAAAAGGAAAAACACACTAGACTAGACAGTAGAGCATTAGGCCAAC
ATGGGGGCTCTGGACAGTTTATATGAATAAATAAAACATTGGCCTGGAAAGTGGCAAGAT
CAACTAAGATTAAAAACAGGTAGTCCAAGGAAAGATTTTAAGTGGTTTTCAAAATAAATT
AGACAACTATTAGCAATAGTATCAGGCCAGCCAAACTAACATGCGTTAGTTGGCAGTCTC
AAGAAAAAAATGTTAAACCCGTTGAAGCAAGAAGTAGAGGAACAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               90-410, gnl|bosTau2|chr5 (53525132-53525472)
               

               
               90-410, gnl|Hg17|chr12 (23984358-23984033)
               

               
               90-410, gnl|Mm7|chr6 (144290689-144290319)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-410, gnl|bosTau2|chr5 (53525132-53525472)
               

               
               90-410, gnl|Hg17|chr12 (23984358-23984033)
               

               
               90-410, gnl|Mm7|chr6 (144290689-144290319)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	90-410, gnl\|bosTau2\|chr5 (53525132-53525472)
	90-410, gnl\|Hg17\|chr12 (23984358-23984033)
	90-410, gnl\|Mm7\|chr6 (144290689-144290319)