Non-Coding RNA Search

rpliv0109_e12.y1

Sequence:


               
               cgaacccatatcctcatggttactagctgggttcgttacccactggaccacaacgggaac
tccTAGAAATGCATACATTTCTTGAATGGAGTTAACACTCTCAGTCTTCTCAACTTTCCC
CTCTTTATAGAAACTGTATGATGCTATTCATTGGGGTTGAAATAACTCTTTGTACAAAGA
GAAACCTCTGTCACCCTAGATATATTTCCCATGCCAACCATTGTATTTTTAGGTGTCTGT
TGATCCAAAAGCTCTAAATGGTTTCATAAAGTCATCTTTAAGCTGCATTCATGCAAAGGA
TTAAATGAAGATCATAGTTATGATCACATGGAGAAATCCTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               cgaacccatatcctcatggttactagctgggttcgttacccactggaccacaacgggaac
tccTAGAAATGCATACATTTCTTGAATGGAGTTAACACTCTCAGTCTTCTCAACTTTCCC
CTCTTTATAGAAACTGTATGATGCTATTCATTGGGGTTGAAATAACTCTTTGTACAAAGA
GAAACCTCTGTCACCCTAGATATATTTCCCATGCCAACCATTGTATTTTTAGGTGTCTGT
TGATCCAAAAGCTCTAAATGGTTTCATAAAGTCATCTTTAAGCTGCATTCATGCAAAGGA
TTAAATGAAGATCATAGTTATGATCACATGGAGAAATCCTATT

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               64-343, gnl|bosTau2|chr10 (28797833-28798114)
               

               
               64-343, gnl|canFam2|chr8 (29841587-29841911)
               

               
               64-343, gnl|echTel1|scaffold_186970 (3080-2748)
               

               
               64-343, gnl|hg17|chr14 (49943553-49943895)
               

               
               64-343, gnl|Hg17|chr14 (49943558-49943839)
               

               
               64-343, gnl|loxAfr1|scaffold_226555 (468-148)
               

               
               64-343, gnl|panTro1|chr15 (49357487-49357828)
               

               
               64-343, gnl|rheMac2|chr7 (113471075-113471416)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               64-343, gnl|bosTau2|chr10 (28797833-28798114)
               

               
               64-343, gnl|canFam2|chr8 (29841587-29841911)
               

               
               64-343, gnl|echTel1|scaffold_186970 (3080-2748)
               

               
               64-343, gnl|hg17|chr14 (49943553-49943895)
               

               
               64-343, gnl|Hg17|chr14 (49943558-49943839)
               

               
               64-343, gnl|loxAfr1|scaffold_226555 (468-148)
               

               
               64-343, gnl|panTro1|chr15 (49357487-49357828)
               

               
               64-343, gnl|rheMac2|chr7 (113471075-113471416)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	64-343, gnl\|bosTau2\|chr10 (28797833-28798114)
	64-343, gnl\|canFam2\|chr8 (29841587-29841911)
	64-343, gnl\|echTel1\|scaffold_186970 (3080-2748)
	64-343, gnl\|hg17\|chr14 (49943553-49943895)
	64-343, gnl\|Hg17\|chr14 (49943558-49943839)
	64-343, gnl\|loxAfr1\|scaffold_226555 (468-148)
	64-343, gnl\|panTro1\|chr15 (49357487-49357828)
	64-343, gnl\|rheMac2\|chr7 (113471075-113471416)