Non-Coding RNA Search

rpliv0112_i15.y1

Sequence:


               
               GAGCCAGCAGATGAAAGTGCCGAAAGGAGGTCAAATGGAAACAAAGCCTATTACCCACTG
TATTTTAGACAGGACCAGGCACTTAGCCGAAGAGCCACTGGGTTATTAGATTAATTTCAA
AAGAGCTTTTACAAGTTGCTTAATTCCATTTTTTTTAAAAAACCCATGGACCACAAACTC
AAATTTCTCTTCAAATGGGGTTAATTTGACAAATGAGGCATGGACCCAGCGTTGTGGAAA
AAGCATTCCACTATAATGAGATCTTGGTCTTTCTTGAAAGACTATGCTATTTATGTAAAT
ATGTCTAGAGGCACCTACTATATAAGCTTTTAGTTTTCTATGATCTATTAGTTTAGCGTT
TATTAAGGAATCATATGTATAGAATTATTAGGCATTCGGGGGGAATGCTATGCAGCAGAA
GTAAAACTGATCTGCTCGGGAGAAACACAGGAGCGCTTCAAAACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCAGCAGATGAAAGTGCCGAAAGGAGGTCAAATGGAAACAAAGCCTATTACCCACTG
TATTTTAGACAGGACCAGGCACTTAGCCGAAGAGCCACTGGGTTATTAGATTAATTTCAA
AAGAGCTTTTACAAGTTGCTTAATTCCATTTTTTTTAAAAAACCCATGGACCACAAACTC
AAATTTCTCTTCAAATGGGGTTAATTTGACAAATGAGGCATGGACCCAGCGTTGTGGAAA
AAGCATTCCACTATAATGAGATCTTGGTCTTTCTTGAAAGACTATGCTATTTATGTAAAT
ATGTCTAGAGGCACCTACTATATAAGCTTTTAGTTTTCTATGATCTATTAGTTTAGCGTT
TATTAAGGAATCATATGTATAGAATTATTAGGCATTCGGGGGGAATGCTATGCAGCAGAA
GTAAAACTGATCTGCTCGGGAGAAACACAGGAGCGCTTCAAAACCAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-467, gnl|bosTau2|chr20 (27614926-27614463)
               

               
               1-467, gnl|Hg17|chr5 (31363892-31364369)
               

               
               1-467, gnl|Mm7|chr15 (13088619-13088131)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-467, gnl|bosTau2|chr20 (27614926-27614463)
               

               
               1-467, gnl|Hg17|chr5 (31363892-31364369)
               

               
               1-467, gnl|Mm7|chr15 (13088619-13088131)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-467, gnl\|bosTau2\|chr20 (27614926-27614463)
	1-467, gnl\|Hg17\|chr5 (31363892-31364369)
	1-467, gnl\|Mm7\|chr15 (13088619-13088131)