rpliv0113_e11.y1
|
CAAAGAATAGCTCAGAATATTTATTTGCCAGCCACATAACCATAAGATAAGAGGGCCCGA
TGTCTACAAGTTATGCTCTGGGCAGCTGAGCTAAGCAGAGATTTTACCAGTGAGGTTAAA
CATGAGCCTAGTAAATACAGGATGTGGACATGGGCACAGAGGGAAGTTCAAAGATACTTT
AATTCCAAGAGGCCTCAACTTCTGGCCACTTAAGTGCCAGTGGGTATGCCCCTATATGGA
AAATATAGACTGTGGGTGGCAAGCTCTTAACTCCGAGTTTTCCCATGCACTTGAACTAGC
TCTCACAACATACACAGCTCCCAAATAGACA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAAGAATAGCTCAGAATATTTATTTGCCAGCCACATAACCATAAGATAAGAGGGCCCGA
TGTCTACAAGTTATGCTCTGGGCAGCTGAGCTAAGCAGAGATTTTACCAGTGAGGTTAAA
CATGAGCCTAGTAAATACAGGATGTGGACATGGGCACAGAGGGAAGTTCAAAGATACTTT
AATTCCAAGAGGCCTCAACTTCTGGCCACTTAAGTGCCAGTGGGTATGCCCCTATATGGA
AAATATAGACTGTGGGTGGCAAGCTCTTAACTCCGAGTTTTCCCATGCACTTGAACTAGC
TCTCACAACATACACAGCTCCCAAATAGACA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-329, gnl|bosTau2|chr15 (24147276-24146951) |
|
1-329, gnl|canFam2|chr21 (41970673-41971098) |
|
1-329, gnl|dasNov1|scaffold_536 (57037-56611) |
|
1-329, gnl|echTel1|scaffold_323183 (221691-221333) |
|
1-329, gnl|hg17|chr11 (15995581-15996008) |
|
1-329, gnl|Hg17|chr11 (15995652-15995978) |
|
1-329, gnl|loxAfr1|scaffold_1315 (53485-53091) |
|
1-329, gnl|mm7|chr7 (111431447-111431881) |
|
1-329, gnl|Mm7|chr7 (111431519-111431851) |
|
1-329, gnl|monDom2|scaffold_10 (55947156-55946765) |
|
1-329, gnl|oryCun1|scaffold_173287 (109211-109635) |
|
1-329, gnl|panTro1|chr9 (16204272-16204699) |
|
1-329, gnl|rheMac2|chr14 (55922337-55921910) |
|
1-329, gnl|rn3|chr1 (173734563-173734984) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-329, gnl|bosTau2|chr15 (24147276-24146951) |
|
1-329, gnl|canFam2|chr21 (41970673-41971098) |
|
1-329, gnl|dasNov1|scaffold_536 (57037-56611) |
|
1-329, gnl|echTel1|scaffold_323183 (221691-221333) |
|
1-329, gnl|hg17|chr11 (15995581-15996008) |
|
1-329, gnl|Hg17|chr11 (15995652-15995978) |
|
1-329, gnl|loxAfr1|scaffold_1315 (53485-53091) |
|
1-329, gnl|mm7|chr7 (111431447-111431881) |
|
1-329, gnl|Mm7|chr7 (111431519-111431851) |
|
1-329, gnl|monDom2|scaffold_10 (55947156-55946765) |
|
1-329, gnl|oryCun1|scaffold_173287 (109211-109635) |
|
1-329, gnl|panTro1|chr9 (16204272-16204699) |
|
1-329, gnl|rheMac2|chr14 (55922337-55921910) |
|
1-329, gnl|rn3|chr1 (173734563-173734984) |