Non-Coding RNA Search

rpliv0114_i8.y1

Sequence:


               
               TTACCTTCAAATTTGTTAATTAGCTCTAGGGTTTTTTGTGACTGTCCTTTGCAAAACTGA
AGAAGAATTTTCTGTATTTCTTGTTTGCTGGTAATGTTTTTAGCAACAATGGATATTGAT
TTTTGTCAAATGCTTTTTCTTATCTACTGAGACGATTATGGTTTATTTTCTGATATGTTT
TCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTACTCAGCTCTTGATTTGTTTTCTA
TCTTTGGAGTCACTTCTATATATTGAAGATTCTAAAGTATGCTTGATTATTTTTTAAGTG
CCTCACATGGAGCTAAAATAATGCTATATATCATAACATATCCAAATGACCCGTTGAGTA
TAACTCTTGTTCAATATTTTTACAGATTAAGTCATGAACTAAGTATTCACAATGTTATTA
ACTCTCTGGGCTCTTTGGCATGAATCTTTTTTTCTTAATAGAGACAGATTTTTATGTTTA
TTCAAGAAATCAGATTGAAGACTTTGTGTGTGACATAAGGTAGTCATTGACTCAGGTGAT
TTCTTAAATTGTGTATCTTCTTAGTGCATATGTATGAACATAATATATATTCTCAGTAGG
AACTTCTAACAGTAGTAATACTTCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACCTTCAAATTTGTTAATTAGCTCTAGGGTTTTTTGTGACTGTCCTTTGCAAAACTGA
AGAAGAATTTTCTGTATTTCTTGTTTGCTGGTAATGTTTTTAGCAACAATGGATATTGAT
TTTTGTCAAATGCTTTTTCTTATCTACTGAGACGATTATGGTTTATTTTCTGATATGTTT
TCTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTACTCAGCTCTTGATTTGTTTTCTA
TCTTTGGAGTCACTTCTATATATTGAAGATTCTAAAGTATGCTTGATTATTTTTTAAGTG
CCTCACATGGAGCTAAAATAATGCTATATATCATAACATATCCAAATGACCCGTTGAGTA
TAACTCTTGTTCAATATTTTTACAGATTAAGTCATGAACTAAGTATTCACAATGTTATTA
ACTCTCTGGGCTCTTTGGCATGAATCTTTTTTTCTTAATAGAGACAGATTTTTATGTTTA
TTCAAGAAATCAGATTGAAGACTTTGTGTGTGACATAAGGTAGTCATTGACTCAGGTGAT
TTCTTAAATTGTGTATCTTCTTAGTGCATATGTATGAACATAATATATATTCTCAGTAGG
AACTTCTAACAGTAGTAATACTTCCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-411, gnl|bosTau2|chr1 (10016700-10017081)
               

               
               1-411, gnl|Hg17|chr3 (159331583-159332078)
               


               
               415-626, gnl|bosTau2|chr1 (10017303-10017511)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-411, gnl|bosTau2|chr1 (10016700-10017081)
               

               
               1-411, gnl|Hg17|chr3 (159331583-159332078)
               


               
               415-626, gnl|bosTau2|chr1 (10017303-10017511)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-411, gnl\|bosTau2\|chr1 (10016700-10017081)
	1-411, gnl\|Hg17\|chr3 (159331583-159332078)

	415-626, gnl\|bosTau2\|chr1 (10017303-10017511)