Non-Coding RNA Search

rpliv0116_f1.y1

Sequence:


               
               GAGCAATGTACAGCGAAGAGACAATCTCTGGCAAGTTTTGTAGAAAAATGTTTCAGTGCC
TAGTCTGAAAAATAACAGTTTCAGTTCTTTGGAACTCTAAAATATATTTTCCTCATATCT
GTTTTCTTCATTTTCGTAATGAAGTACTTTGCTATGTAGCTGTGTACATATCACTACAGT
TATAGGAAGTTTCAGTCTACAGTCCATCTAAAGGACCAACCTGCCTTACACATCTCAAGG
AATTCAGCTGGTGAAATAATTTGAACTAATCAAGGGATAAAATTTTAATGTTCTGGAGAC
TTTATTTTCACATATTACTTGTTAAATGCTGGACTATACTATGAAAAGGTTTTCAAGAGA
TTATTTAAGTATGTAATAGATCAGTGTTTCTTACAGGTAAAATGCTAAAATAAGCTGCCT
ACAATAGGTACGGATTATATTTTTGAGTTTTGTAGAATATTACAAATTAACACAGAAAAT
GTTTAATTTATGCAACACATGTTCACACAAATTTGGTGGGACATTAGAAAGAATCACTAT
TTGAAAAAAGATCTGGTTCACTTATACTACATATTATCCTTTCCTAGCATTAGGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCAATGTACAGCGAAGAGACAATCTCTGGCAAGTTTTGTAGAAAAATGTTTCAGTGCC
TAGTCTGAAAAATAACAGTTTCAGTTCTTTGGAACTCTAAAATATATTTTCCTCATATCT
GTTTTCTTCATTTTCGTAATGAAGTACTTTGCTATGTAGCTGTGTACATATCACTACAGT
TATAGGAAGTTTCAGTCTACAGTCCATCTAAAGGACCAACCTGCCTTACACATCTCAAGG
AATTCAGCTGGTGAAATAATTTGAACTAATCAAGGGATAAAATTTTAATGTTCTGGAGAC
TTTATTTTCACATATTACTTGTTAAATGCTGGACTATACTATGAAAAGGTTTTCAAGAGA
TTATTTAAGTATGTAATAGATCAGTGTTTCTTACAGGTAAAATGCTAAAATAAGCTGCCT
ACAATAGGTACGGATTATATTTTTGAGTTTTGTAGAATATTACAAATTAACACAGAAAAT
GTTTAATTTATGCAACACATGTTCACACAAATTTGGTGGGACATTAGAAAGAATCACTAT
TTGAAAAAAGATCTGGTTCACTTATACTACATATTATCCTTTCCTAGCATTAGGTGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               189-597, gnl|bosTau2|chr11 (75023424-75023840)
               

               
               189-597, gnl|Hg17|chr2 (114188798-114188394)
               

               
               189-597, gnl|Mm7|chr1 (125473545-125473904)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               189-597, gnl|bosTau2|chr11 (75023424-75023840)
               

               
               189-597, gnl|Hg17|chr2 (114188798-114188394)
               

               
               189-597, gnl|Mm7|chr1 (125473545-125473904)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	189-597, gnl\|bosTau2\|chr11 (75023424-75023840)
	189-597, gnl\|Hg17\|chr2 (114188798-114188394)
	189-597, gnl\|Mm7\|chr1 (125473545-125473904)