Non-Coding RNA Search

rpliv0123_p10.y1

Sequence:


               
               TGAGGGTATATATGTAGTTTCAGCCTGTTTCTTATTATTTTCTCTTTTGCTATGTAATAG
TTTACTGTCCTACTAAATTAAATTATCAAATCATGTTCATCCTAAGGAATAAGATGATTT
GTACAACCAGGACATTCTATCATAAGAGCATCAAAACATGTTTCTTGTACAGCTGTTCTA
ACTGTTGAATGTTGAGGTCTCTTGACACTTGTACAGAGATGTGTAACTTGTATTCACTTT
CATTATCATTTTCTCTTAACAGTTGACTTCAAACCCCGTGCCAGCATGGATACTGTCCAT
CACATGTTACTCTTTGGATGCAATATGCCAGCATCCACTGGAAATTACTGGTAAGGGATA
ATGGGTTTATAGTACAAGGTGTGTAGAAAATATGTTTTTTATAAGTACAAAGTTCATTTT
TGCACGTATTTTACAACTGATTAATAAATAAACAAATACTTGTTTTTTCAAAAAGAATAT
TGTTCTTTTGCATCACATGGTTATCATCGCTTGATTATCAGTTATTTAGTCTGCTGTGGA
ACACAATCATTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGGTATATATGTAGTTTCAGCCTGTTTCTTATTATTTTCTCTTTTGCTATGTAATAG
TTTACTGTCCTACTAAATTAAATTATCAAATCATGTTCATCCTAAGGAATAAGATGATTT
GTACAACCAGGACATTCTATCATAAGAGCATCAAAACATGTTTCTTGTACAGCTGTTCTA
ACTGTTGAATGTTGAGGTCTCTTGACACTTGTACAGAGATGTGTAACTTGTATTCACTTT
CATTATCATTTTCTCTTAACAGTTGACTTCAAACCCCGTGCCAGCATGGATACTGTCCAT
CACATGTTACTCTTTGGATGCAATATGCCAGCATCCACTGGAAATTACTGGTAAGGGATA
ATGGGTTTATAGTACAAGGTGTGTAGAAAATATGTTTTTTATAAGTACAAAGTTCATTTT
TGCACGTATTTTACAACTGATTAATAAATAAACAAATACTTGTTTTTTCAAAAAGAATAT
TGTTCTTTTGCATCACATGGTTATCATCGCTTGATTATCAGTTATTTAGTCTGCTGTGGA
ACACAATCATTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-549, gnl|bosTau2|chr7 (64734338-64733791)
               

               
               1-549, gnl|Hg17|chr5 (102277300-102277819)
               

               
               1-549, gnl|Mm7|chr1 (97787206-97786725)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-549, gnl|bosTau2|chr7 (64734338-64733791)
               

               
               1-549, gnl|Hg17|chr5 (102277300-102277819)
               

               
               1-549, gnl|Mm7|chr1 (97787206-97786725)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	1-549, gnl\|bosTau2\|chr7 (64734338-64733791)
	1-549, gnl\|Hg17\|chr5 (102277300-102277819)
	1-549, gnl\|Mm7\|chr1 (97787206-97786725)