Non-Coding RNA Search

rpliv0127_p5.y1

Sequence:


               
               TAGGAAGTTGGCTATGATATGTGTGAATAAATGAAGCAGGACACAGGCAGAAGGGCAGCC
CTCAGTGAGCTCAGATCACCCATCACCTGGCCAACCCAGGCTACTCACCAGCTGATCCCA
ATACAGGAGTTGGCAGGTAAAGGCGAAAACAGGGGTTAGGAGCTTTTTTCTATTTCCCTA
CTTCTAATTGTTCTTAAGCCACACTCCCTAGGTGGCTTGAACATTAATAGGCTGAAGCTA
TGCTCTAGCATTATACTGGGTTAATTATGCTCTTTGGGTTGCGAAGAAATAATTTCACTT
AGGCTACCTCAATGAATGACAGCTCGTGGTTACACAGGGTAATATGTGTGGTTTCTCCTT
TCTCTACCCATTCGCCCCCACTCTCACCATCCTCTAAGTCCCAAATTAGCTGAATGAATC
TCTCCACATTTCTCAGTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGGAAGTTGGCTATGATATGTGTGAATAAATGAAGCAGGACACAGGCAGAAGGGCAGCC
CTCAGTGAGCTCAGATCACCCATCACCTGGCCAACCCAGGCTACTCACCAGCTGATCCCA
ATACAGGAGTTGGCAGGTAAAGGCGAAAACAGGGGTTAGGAGCTTTTTTCTATTTCCCTA
CTTCTAATTGTTCTTAAGCCACACTCCCTAGGTGGCTTGAACATTAATAGGCTGAAGCTA
TGCTCTAGCATTATACTGGGTTAATTATGCTCTTTGGGTTGCGAAGAAATAATTTCACTT
AGGCTACCTCAATGAATGACAGCTCGTGGTTACACAGGGTAATATGTGTGGTTTCTCCTT
TCTCTACCCATTCGCCCCCACTCTCACCATCCTCTAAGTCCCAAATTAGCTGAATGAATC
TCTCCACATTTCTCAGTTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-440, gnl|bosTau2|chr20 (7420335-7419892)
               

               
               2-440, gnl|Hg17|chr5 (68332858-68333301)
               

               
               2-440, gnl|Mm7|chr13 (98004130-98003679)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-440, gnl|bosTau2|chr20 (7420335-7419892)
               

               
               2-440, gnl|Hg17|chr5 (68332858-68333301)
               

               
               2-440, gnl|Mm7|chr13 (98004130-98003679)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	2-440, gnl\|bosTau2\|chr20 (7420335-7419892)
	2-440, gnl\|Hg17\|chr5 (68332858-68333301)
	2-440, gnl\|Mm7\|chr13 (98004130-98003679)