Non-Coding RNA Search

rpliv0129_a12.y1

Sequence:


               
               TTTAATTAATTTTAATATATTTTTTTATGTTTTAAGACACGGAAATCAATTAAATTATTA
TCGTGAGGGGCGGTATAAAATACTAGTGTTTAAATATCTACTCAGATATTAGTGGCTTTG
CTGTCTTTGTAAATCAATGGACACCTCTGGAGCCAAGTTTTCTTATCAGTAAAGTGGGAA
TGATATTTACCTCTTGAGAAATTTTCAAGTCACAACATAGATTTCGTGTTCAAAGGGTCA
TTGTCACCTTTCAGGTTTGATAGAAATGGTACTTGCAGGATTATCATTCTGTCATTGCAA
GAGAGGATGAAATAATAATCACACAAATATCCTTGCAAATTGCCCAGAGTCAGCAAATCT
CTTGGTTTTCTTTAATGTCTCTCTTGCATTTATTCTCAGTGTAGTAGCACATACATAAGC
ATAACCACATTAATTTTTTAACACTGCAAATTAACATAAAATGTGCATTTGCACCATTCC
ATTTCTCCTTACTTGGCAACACAAGGTACATTAAGGCCAGAATGTTCTTAATGAGGTCTC
TTACCCTCTCCCAGTTATGATTCATTTAATTTTAAAATTCTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAATTAATTTTAATATATTTTTTTATGTTTTAAGACACGGAAATCAATTAAATTATTA
TCGTGAGGGGCGGTATAAAATACTAGTGTTTAAATATCTACTCAGATATTAGTGGCTTTG
CTGTCTTTGTAAATCAATGGACACCTCTGGAGCCAAGTTTTCTTATCAGTAAAGTGGGAA
TGATATTTACCTCTTGAGAAATTTTCAAGTCACAACATAGATTTCGTGTTCAAAGGGTCA
TTGTCACCTTTCAGGTTTGATAGAAATGGTACTTGCAGGATTATCATTCTGTCATTGCAA
GAGAGGATGAAATAATAATCACACAAATATCCTTGCAAATTGCCCAGAGTCAGCAAATCT
CTTGGTTTTCTTTAATGTCTCTCTTGCATTTATTCTCAGTGTAGTAGCACATACATAAGC
ATAACCACATTAATTTTTTAACACTGCAAATTAACATAAAATGTGCATTTGCACCATTCC
ATTTCTCCTTACTTGGCAACACAAGGTACATTAAGGCCAGAATGTTCTTAATGAGGTCTC
TTACCCTCTCCCAGTTATGATTCATTTAATTTTAAAATTCTTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               76-584, gnl|bosTau2|chr6 (19882465-19882998)
               

               
               76-584, gnl|Hg17|chr4 (19953146-19953661)
               

               
               76-584, gnl|Mm7|chr5 (47333087-47333585)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               76-584, gnl|bosTau2|chr6 (19882465-19882998)
               

               
               76-584, gnl|Hg17|chr4 (19953146-19953661)
               

               
               76-584, gnl|Mm7|chr5 (47333087-47333585)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	76-584, gnl\|bosTau2\|chr6 (19882465-19882998)
	76-584, gnl\|Hg17\|chr4 (19953146-19953661)
	76-584, gnl\|Mm7\|chr5 (47333087-47333585)