Non-Coding RNA Search

rpliv0133_n1.y1

Sequence:


               
               GGGACGTGTCCAAAGCAGGCATGACCTTGAACACAAGTATAGCGCAGCGGTTGGAATTAG
GCCACTAACTGCTGACTTAACTTTTCCCTCATTATTATAATTAGTGCCACAACCAAGACA
GTGACTCATGCAATTATGCAAGTCAGAATACTAACTTAAAATGACATTATTGATAGTTAC
ACAATAACTGCCCAAGCCAAAAGCTCTGATTGAATAGATGAACTTTCGCTTAATAAGCAT
TGTTTGTTTGGGAGAGACACCTTTTCAAAAGAAGGGATTCATAGAAGAGAGAAAGATCTT
TGGGGATCAAGATTTGGGAAATCACTCACTTGATGTCCAGACCGTGACCTTGAGTGGGGG
AAGTTCAGAGAGAGAAGATGTACTAAGCAAAGATTGGAGAGTAAGAGCACATGTGAACCA
AGCCTTGCAAAATAGCTAAGATTTAGACATTGATGGGTAAACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGACGTGTCCAAAGCAGGCATGACCTTGAACACAAGTATAGCGCAGCGGTTGGAATTAG
GCCACTAACTGCTGACTTAACTTTTCCCTCATTATTATAATTAGTGCCACAACCAAGACA
GTGACTCATGCAATTATGCAAGTCAGAATACTAACTTAAAATGACATTATTGATAGTTAC
ACAATAACTGCCCAAGCCAAAAGCTCTGATTGAATAGATGAACTTTCGCTTAATAAGCAT
TGTTTGTTTGGGAGAGACACCTTTTCAAAAGAAGGGATTCATAGAAGAGAGAAAGATCTT
TGGGGATCAAGATTTGGGAAATCACTCACTTGATGTCCAGACCGTGACCTTGAGTGGGGG
AAGTTCAGAGAGAGAAGATGTACTAAGCAAAGATTGGAGAGTAAGAGCACATGTGAACCA
AGCCTTGCAAAATAGCTAAGATTTAGACATTGATGGGTAAACAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               129-240, - strand, RNAz p=0.904455

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               129-240, - strand, RNAz p=0.904455

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               11-464, gnl|bosTau2|chr29 (5757105-5756651)
               

               
               11-464, gnl|Hg17|chr11 (86076004-86075522)
               

               
               11-464, gnl|Mm7|chr7 (85554615-85555289)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-464, gnl|bosTau2|chr29 (5757105-5756651)
               

               
               11-464, gnl|Hg17|chr11 (86076004-86075522)
               

               
               11-464, gnl|Mm7|chr7 (85554615-85555289)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	11-464, gnl\|bosTau2\|chr29 (5757105-5756651)
	11-464, gnl\|Hg17\|chr11 (86076004-86075522)
	11-464, gnl\|Mm7\|chr7 (85554615-85555289)