Non-Coding RNA Search

rpliv0140_p11.y1

Sequence:


               
               TTTGAAAATGCGGTTTGTCTTTTTTTGGAAAGTCAGGCTTGTCTGTTGAAGAGCTCAAAA
CACTTGACCAGCTCTCTCATTTATCTTAACATGTGTATGCTATATTTATTCTCCCCTCAC
AGATGGGGAAATGAAGCTCGCCCAAGGGCCATATTTAGCTAAGTCTTGATCTTCTGCCTT
GGGGGGTCAGCTTAGATAAAACCGAATCCTAAAACTCCGTTTTCATGCAGTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGAAAATGCGGTTTGTCTTTTTTTGGAAAGTCAGGCTTGTCTGTTGAAGAGCTCAAAA
CACTTGACCAGCTCTCTCATTTATCTTAACATGTGTATGCTATATTTATTCTCCCCTCAC
AGATGGGGAAATGAAGCTCGCCCAAGGGCCATATTTAGCTAAGTCTTGATCTTCTGCCTT
GGGGGGTCAGCTTAGATAAAACCGAATCCTAAAACTCCGTTTTCATGCAGTCG

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               3-231, gnl|bosTau2|chr11 (23080350-23080121)
               

               
               3-231, gnl|canFam2|chr10 (51917878-51918707)
               

               
               3-231, gnl|echTel1|scaffold_242221 (4384-5208)
               

               
               3-231, gnl|hg17|chr2 (46707626-46708446)
               

               
               3-231, gnl|Hg17|chr2 (46707900-46708122)
               

               
               3-231, gnl|loxAfr1|scaffold_140183 (5093-4233)
               

               
               3-231, gnl|mm7|chr17 (85289280-85290000)
               

               
               3-231, gnl|Mm7|chr17 (85289538-85289769)
               

               
               3-231, gnl|oryCun1|scaffold_1122 (6537-5833)
               

               
               3-231, gnl|panTro1|chr12 (48704771-48705604)
               

               
               3-231, gnl|rheMac2|chr13 (46694144-46694955)
               

               
               3-231, gnl|rn3|chr6 (10435247-10435986)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-231, gnl|bosTau2|chr11 (23080350-23080121)
               

               
               3-231, gnl|canFam2|chr10 (51917878-51918707)
               

               
               3-231, gnl|echTel1|scaffold_242221 (4384-5208)
               

               
               3-231, gnl|hg17|chr2 (46707626-46708446)
               

               
               3-231, gnl|Hg17|chr2 (46707900-46708122)
               

               
               3-231, gnl|loxAfr1|scaffold_140183 (5093-4233)
               

               
               3-231, gnl|mm7|chr17 (85289280-85290000)
               

               
               3-231, gnl|Mm7|chr17 (85289538-85289769)
               

               
               3-231, gnl|oryCun1|scaffold_1122 (6537-5833)
               

               
               3-231, gnl|panTro1|chr12 (48704771-48705604)
               

               
               3-231, gnl|rheMac2|chr13 (46694144-46694955)
               

               
               3-231, gnl|rn3|chr6 (10435247-10435986)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	3-231, gnl\|bosTau2\|chr11 (23080350-23080121)
	3-231, gnl\|canFam2\|chr10 (51917878-51918707)
	3-231, gnl\|echTel1\|scaffold_242221 (4384-5208)
	3-231, gnl\|hg17\|chr2 (46707626-46708446)
	3-231, gnl\|Hg17\|chr2 (46707900-46708122)
	3-231, gnl\|loxAfr1\|scaffold_140183 (5093-4233)
	3-231, gnl\|mm7\|chr17 (85289280-85290000)
	3-231, gnl\|Mm7\|chr17 (85289538-85289769)
	3-231, gnl\|oryCun1\|scaffold_1122 (6537-5833)
	3-231, gnl\|panTro1\|chr12 (48704771-48705604)
	3-231, gnl\|rheMac2\|chr13 (46694144-46694955)
	3-231, gnl\|rn3\|chr6 (10435247-10435986)