Non-Coding RNA Search

rplun0102_f7.y1

Sequence:


               
               AATCCATTAAAACAAATGTATGCATATTTGTATATGTGTCTATGATGTGAACACGCATAG
TTTTTGTATTTCCTTTAGCAAATTTGGTGCCAAGACTCAATTATCTCACATCTAGAATTT
GTGTCACTTTGTGCTGCTGATACACTTCCAACCTCTCTTCATTTAGAAATTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCCATTAAAACAAATGTATGCATATTTGTATATGTGTCTATGATGTGAACACGCATAG
TTTTTGTATTTCCTTTAGCAAATTTGGTGCCAAGACTCAATTATCTCACATCTAGAATTT
GTGTCACTTTGTGCTGCTGATACACTTCCAACCTCTCTTCATTTAGAAATTCTTT

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               20-175, gnl|bosTau2|chr5 (54907140-54907287)
               

               
               20-175, gnl|canFam2|chr30 (14396809-14397071)
               

               
               20-175, gnl|hg17|chr15 (42845290-42845572)
               

               
               20-175, gnl|Hg17|chr15 (42845349-42845506)
               

               
               20-175, gnl|oryCun1|scaffold_173038 (50243-49991)
               

               
               20-175, gnl|panTro1|chr16_random (13078814-13079102)
               

               
               20-175, gnl|rheMac2|chr7 (23178878-23179168)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-175, gnl|bosTau2|chr5 (54907140-54907287)
               

               
               20-175, gnl|canFam2|chr30 (14396809-14397071)
               

               
               20-175, gnl|hg17|chr15 (42845290-42845572)
               

               
               20-175, gnl|Hg17|chr15 (42845349-42845506)
               

               
               20-175, gnl|oryCun1|scaffold_173038 (50243-49991)
               

               
               20-175, gnl|panTro1|chr16_random (13078814-13079102)
               

               
               20-175, gnl|rheMac2|chr7 (23178878-23179168)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lun (0.150489)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	20-175, gnl\|bosTau2\|chr5 (54907140-54907287)
	20-175, gnl\|canFam2\|chr30 (14396809-14397071)
	20-175, gnl\|hg17\|chr15 (42845290-42845572)
	20-175, gnl\|Hg17\|chr15 (42845349-42845506)
	20-175, gnl\|oryCun1\|scaffold_173038 (50243-49991)
	20-175, gnl\|panTro1\|chr16_random (13078814-13079102)
	20-175, gnl\|rheMac2\|chr7 (23178878-23179168)