Non-Coding RNA Search

rplun0137_n9.y1

Sequence:


               
               GTTTTTAAGTAGATGACAAATTACCCAGAAGATGTCAACTCATTCAGTTTAGTTCCAAAA
TGTCTATAAGGATATGTACCCAGTTGTAGAACACTGTGCTATTGTTCTGAATTTTTTTGG
ACTTGTTAGGTGATTATTTTAAAATAAGGAAGTGAGAAAAACCCAGGTACAGCACAGAAA
TTATTTCCTCATTTTACTGGTGCTCTATTCTTTGCTGCAAATCTCACTGGGATATAAAAA
TAGATTCTGTTAGTCTGTGTGGGAGAAGACTTGGCGGGTAATATTGAGTTTTATTTCAAA
AGTTTTCATCATAATTTTGTGTGTCCACACATGTGTGTACATTTCTGCATGTTAAGGGGG
ATGAGAAGCACTAAACCCAGTTCTTCAAGTATTATTCAGTATTATACTGGAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTAAGTAGATGACAAATTACCCAGAAGATGTCAACTCATTCAGTTTAGTTCCAAAA
TGTCTATAAGGATATGTACCCAGTTGTAGAACACTGTGCTATTGTTCTGAATTTTTTTGG
ACTTGTTAGGTGATTATTTTAAAATAAGGAAGTGAGAAAAACCCAGGTACAGCACAGAAA
TTATTTCCTCATTTTACTGGTGCTCTATTCTTTGCTGCAAATCTCACTGGGATATAAAAA
TAGATTCTGTTAGTCTGTGTGGGAGAAGACTTGGCGGGTAATATTGAGTTTTATTTCAAA
AGTTTTCATCATAATTTTGTGTGTCCACACATGTGTGTACATTTCTGCATGTTAAGGGGG
ATGAGAAGCACTAAACCCAGTTCTTCAAGTATTATTCAGTATTATACTGGAGCT

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               17-213, gnl|bosTau2|chr26 (8159146-8158950)
               

               
               17-213, gnl|canFam2|chr28 (13078384-13078620)
               

               
               17-213, gnl|dasNov1|scaffold_308 (185328-185560)
               

               
               17-213, gnl|echTel1|scaffold_310014 (1806-1571)
               

               
               17-213, gnl|hg17|chr10 (98453268-98453502)
               

               
               17-213, gnl|Hg17|chr10 (98453537-98453359)
               

               
               17-213, gnl|loxAfr1|scaffold_7166 (39880-39645)
               

               
               17-213, gnl|mm7|chr19 (41266287-41266520)
               

               
               17-213, gnl|Mm7|chr19 (41266553-41266378)
               

               
               17-213, gnl|monDom2|scaffold_14 (25879729-25879502)
               

               
               17-213, gnl|panTro1|chr8 (100144143-100144377)
               

               
               17-213, gnl|rheMac2|chr9 (96244427-96244644)
               

               
               17-213, gnl|rn3|chr1_random (3537355-3537123)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-213, gnl|bosTau2|chr26 (8159146-8158950)
               

               
               17-213, gnl|canFam2|chr28 (13078384-13078620)
               

               
               17-213, gnl|dasNov1|scaffold_308 (185328-185560)
               

               
               17-213, gnl|echTel1|scaffold_310014 (1806-1571)
               

               
               17-213, gnl|hg17|chr10 (98453268-98453502)
               

               
               17-213, gnl|Hg17|chr10 (98453537-98453359)
               

               
               17-213, gnl|loxAfr1|scaffold_7166 (39880-39645)
               

               
               17-213, gnl|mm7|chr19 (41266287-41266520)
               

               
               17-213, gnl|Mm7|chr19 (41266553-41266378)
               

               
               17-213, gnl|monDom2|scaffold_14 (25879729-25879502)
               

               
               17-213, gnl|panTro1|chr8 (100144143-100144377)
               

               
               17-213, gnl|rheMac2|chr9 (96244427-96244644)
               

               
               17-213, gnl|rn3|chr1_random (3537355-3537123)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lun (0.150489)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	17-213, gnl\|bosTau2\|chr26 (8159146-8158950)
	17-213, gnl\|canFam2\|chr28 (13078384-13078620)
	17-213, gnl\|dasNov1\|scaffold_308 (185328-185560)
	17-213, gnl\|echTel1\|scaffold_310014 (1806-1571)
	17-213, gnl\|hg17\|chr10 (98453268-98453502)
	17-213, gnl\|Hg17\|chr10 (98453537-98453359)
	17-213, gnl\|loxAfr1\|scaffold_7166 (39880-39645)
	17-213, gnl\|mm7\|chr19 (41266287-41266520)
	17-213, gnl\|Mm7\|chr19 (41266553-41266378)
	17-213, gnl\|monDom2\|scaffold_14 (25879729-25879502)
	17-213, gnl\|panTro1\|chr8 (100144143-100144377)
	17-213, gnl\|rheMac2\|chr9 (96244427-96244644)
	17-213, gnl\|rn3\|chr1_random (3537355-3537123)