Non-Coding RNA Search

rpro32_a20.y1

Sequence:


               
               GGGATTAGTTAATAAAGACATTGGAAAAAAACTAGTGAGTTGTCCTATGGCAGGACTAGT
CAGTAAAGATGCCATAAACCTTAAAGCGGAAGCACTGCTTCCCACTCAGGAACCACTTAA
GGCTTCTTGTAGTACAAACATCAGTAGTCATGAAAGTCAGGAACTTTCTGAATCCCCGAA
AGACAGTTCCACCAGCAAAACTTTTGAGAAGAATGTTATACGGCAGAGTAAAGAAAGCAT
ATTGGAAAAGTTCTCAGTTCGAAAGGAAATTATTAATTTGGAAAAAGAAATATTTAATGA
AGGAACATGCATTCAGGCAGACAGGGGGTCTTATGAAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATTAGTTAATAAAGACATTGGAAAAAAACTAGTGAGTTGTCCTATGGCAGGACTAGT
CAGTAAAGATGCCATAAACCTTAAAGCGGAAGCACTGCTTCCCACTCAGGAACCACTTAA
GGCTTCTTGTAGTACAAACATCAGTAGTCATGAAAGTCAGGAACTTTCTGAATCCCCGAA
AGACAGTTCCACCAGCAAAACTTTTGAGAAGAATGTTATACGGCAGAGTAAAGAAAGCAT
ATTGGAAAAGTTCTCAGTTCGAAAGGAAATTATTAATTTGGAAAAAGAAATATTTAATGA
AGGAACATGCATTCAGGCAGACAGGGGGTCTTATGAAACCT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-324, gnl|bosTau2|chr3 (13547955-13547632)
               

               
               1-324, gnl|canFam2|chr7 (45079797-45078964)
               

               
               1-324, gnl|echTel1|scaffold_278231 (12347-11517)
               

               
               1-324, gnl|galGal2|chrE26C13 (70491-71324)
               

               
               1-324, gnl|hg17|chr1 (152263662-152264495)
               

               
               1-324, gnl|Hg17|chr1 (152264543-152264220)
               

               
               1-324, gnl|loxAfr1|scaffold_88696 (2330-1500)
               

               
               1-324, gnl|mm7|chr3 (89096687-89095851)
               

               
               1-324, gnl|Mm7|chr3 (89095801-89096127)
               

               
               1-324, gnl|monDom2|scaffold_59 (2126555-2125716)
               

               
               1-324, gnl|oryCun1|scaffold_102741 (4746-5579)
               

               
               1-324, gnl|panTro1|chr1 (134257779-134258612)
               

               
               1-324, gnl|rheMac2|chr1 (134040212-134041045)
               

               
               1-324, gnl|rn3|chr2 (180995130-180994294)
               

               
               1-324, gnl|xenTro1|scaffold_1402 (119776-118964)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-324, gnl|bosTau2|chr3 (13547955-13547632)
               

               
               1-324, gnl|canFam2|chr7 (45079797-45078964)
               

               
               1-324, gnl|echTel1|scaffold_278231 (12347-11517)
               

               
               1-324, gnl|galGal2|chrE26C13 (70491-71324)
               

               
               1-324, gnl|hg17|chr1 (152263662-152264495)
               

               
               1-324, gnl|Hg17|chr1 (152264543-152264220)
               

               
               1-324, gnl|loxAfr1|scaffold_88696 (2330-1500)
               

               
               1-324, gnl|mm7|chr3 (89096687-89095851)
               

               
               1-324, gnl|Mm7|chr3 (89095801-89096127)
               

               
               1-324, gnl|monDom2|scaffold_59 (2126555-2125716)
               

               
               1-324, gnl|oryCun1|scaffold_102741 (4746-5579)
               

               
               1-324, gnl|panTro1|chr1 (134257779-134258612)
               

               
               1-324, gnl|rheMac2|chr1 (134040212-134041045)
               

               
               1-324, gnl|rn3|chr2 (180995130-180994294)
               

               
               1-324, gnl|xenTro1|scaffold_1402 (119776-118964)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pro (0.512033)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)

	1-324, gnl\|bosTau2\|chr3 (13547955-13547632)
	1-324, gnl\|canFam2\|chr7 (45079797-45078964)
	1-324, gnl\|echTel1\|scaffold_278231 (12347-11517)
	1-324, gnl\|galGal2\|chrE26C13 (70491-71324)
	1-324, gnl\|hg17\|chr1 (152263662-152264495)
	1-324, gnl\|Hg17\|chr1 (152264543-152264220)
	1-324, gnl\|loxAfr1\|scaffold_88696 (2330-1500)
	1-324, gnl\|mm7\|chr3 (89096687-89095851)
	1-324, gnl\|Mm7\|chr3 (89095801-89096127)
	1-324, gnl\|monDom2\|scaffold_59 (2126555-2125716)
	1-324, gnl\|oryCun1\|scaffold_102741 (4746-5579)
	1-324, gnl\|panTro1\|chr1 (134257779-134258612)
	1-324, gnl\|rheMac2\|chr1 (134040212-134041045)
	1-324, gnl\|rn3\|chr2 (180995130-180994294)
	1-324, gnl\|xenTro1\|scaffold_1402 (119776-118964)