Non-Coding RNA Search

rpro40_m13.y1

Sequence:


               
               TTGAAAACAACACTATGCTTTTTTATTTCTGCATTGTCCCAGTATACAGGTTGATTCTGA
GGTGATCTGCTTTTAGTGGGCACACATCAAGAAGGAGAAGTGAGCAGACAGTTGCAGGGC
ACCTACACCTTAAGTCAAGCCTCTTACAAAGTAAGCTGTAACTGCACGTAAACATGAGTC
GCAGTTTTGGCAACTTCAGTGAACTGTGTGCTGGGGCGGAAGAGGCAAGTGGAAGGGGAA
AAAACCCAGGCCCCAAGCTTTCAGCATACAAAGGGTCAGAGAAGTCTCTGCTCTTGGCCT
TGGCTTTCCAGCACAAGCTCTGTCCACTACCAGGGAAGCTGGCCTAGCTCTGCAGTCGAG
CTAGTAGCCTTGTGTTTAGAGAGTTGATATGGAAATTCACTGAGAAGCTTAAAATTTTAC
ATTGCCTTAAACATTTGGGGGGGTAGGATGGTGGGGAGCTTAAACTTGTACTTTCTAAAT
TGGTATCTTGTGACAGAATTCTGGTCATCCTGACCTAATTAAGGCCCTGACAGTGTTTAT
TAAAAATAGAggagttcccgttgtggctcagtggttaatgaacctgactgggaaccatga
g

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAAAACAACACTATGCTTTTTTATTTCTGCATTGTCCCAGTATACAGGTTGATTCTGA
GGTGATCTGCTTTTAGTGGGCACACATCAAGAAGGAGAAGTGAGCAGACAGTTGCAGGGC
ACCTACACCTTAAGTCAAGCCTCTTACAAAGTAAGCTGTAACTGCACGTAAACATGAGTC
GCAGTTTTGGCAACTTCAGTGAACTGTGTGCTGGGGCGGAAGAGGCAAGTGGAAGGGGAA
AAAACCCAGGCCCCAAGCTTTCAGCATACAAAGGGTCAGAGAAGTCTCTGCTCTTGGCCT
TGGCTTTCCAGCACAAGCTCTGTCCACTACCAGGGAAGCTGGCCTAGCTCTGCAGTCGAG
CTAGTAGCCTTGTGTTTAGAGAGTTGATATGGAAATTCACTGAGAAGCTTAAAATTTTAC
ATTGCCTTAAACATTTGGGGGGGTAGGATGGTGGGGAGCTTAAACTTGTACTTTCTAAAT
TGGTATCTTGTGACAGAATTCTGGTCATCCTGACCTAATTAAGGCCCTGACAGTGTTTAT
TAAAAATAGAggagttcccgttgtggctcagtggttaatgaacctgactgggaaccatga
g

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               149-547, gnl|bosTau2|chr5 (56945636-56945228)
               

               
               149-547, gnl|Hg17|chr12 (22241290-22240915)
               

               
               149-547, gnl|Mm7|chr6 (142916155-142915737)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               149-547, gnl|bosTau2|chr5 (56945636-56945228)
               

               
               149-547, gnl|Hg17|chr12 (22241290-22240915)
               

               
               149-547, gnl|Mm7|chr6 (142916155-142915737)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pro (0.512033)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)

	149-547, gnl\|bosTau2\|chr5 (56945636-56945228)
	149-547, gnl\|Hg17\|chr12 (22241290-22240915)
	149-547, gnl\|Mm7\|chr6 (142916155-142915737)