Non-Coding RNA Search

rptbr0135_k17.y1

Sequence:


               
               AAGAAAAGCAACTAGAGAGATGGGAAAGCTATGAGTGACAGTGACACATCATCTGTCACT
GGTTAATGGGGTCTATGGTCCATTGCCCAAAGTAAGCAATGAGAAGAGTTACCGGGGTTT
TGAAAGTTTCTTCTTGAAAATAAAAAGCTCTTCCTACAGGCTATCCAAAAAGTATCTGCA
GGCCCTCGCTTTTGTCTGATAGCTATGGAACTCATTTATTTTAGTAACAGCAGTAAGGGA
AGGCAGAAATGATGTAGACAAAAGCTCTGTGCTCAGAAGTTTGGTTTTGACTACCTTAAG
CAAATGGAAAAAAAAAAAAAGCTGGTTCTCTCTGACCTCAGTATTTGTGGCTGTTCTCTT
CTTGGTCATATAATAAATAAGTTCTCAATTCCTCACAAGAGAAAAAGGCCTAGTTCAGAG
ATAGGAGCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAAAGCAACTAGAGAGATGGGAAAGCTATGAGTGACAGTGACACATCATCTGTCACT
GGTTAATGGGGTCTATGGTCCATTGCCCAAAGTAAGCAATGAGAAGAGTTACCGGGGTTT
TGAAAGTTTCTTCTTGAAAATAAAAAGCTCTTCCTACAGGCTATCCAAAAAGTATCTGCA
GGCCCTCGCTTTTGTCTGATAGCTATGGAACTCATTTATTTTAGTAACAGCAGTAAGGGA
AGGCAGAAATGATGTAGACAAAAGCTCTGTGCTCAGAAGTTTGGTTTTGACTACCTTAAG
CAAATGGAAAAAAAAAAAAAGCTGGTTCTCTCTGACCTCAGTATTTGTGGCTGTTCTCTT
CTTGGTCATATAATAAATAAGTTCTCAATTCCTCACAAGAGAAAAAGGCCTAGTTCAGAG
ATAGGAGCTAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-370, gnl|bosTau2|chr5 (38019751-38019378)
               

               
               1-370, gnl|Hg17|chr12 (101362563-101361853)
               

               
               1-370, gnl|Mm7|chr10 (87432373-87432801)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-370, gnl|bosTau2|chr5 (38019751-38019378)
               

               
               1-370, gnl|Hg17|chr12 (101362563-101361853)
               

               
               1-370, gnl|Mm7|chr10 (87432373-87432801)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tbr (0.154178)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)

	1-370, gnl\|bosTau2\|chr5 (38019751-38019378)
	1-370, gnl\|Hg17\|chr12 (101362563-101361853)
	1-370, gnl\|Mm7\|chr10 (87432373-87432801)