rptbr0137_b21.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGAGCGCCGCTCCGGCTGCACCGCGCTCGCTCTGAGCTCCCGGTTCCTGCTAAGCTAGC GCCGCCGTCGTCTCCCTCCAGCCGCCATCATGATCATCTACCGGGACCTCATCAGCCATG ATGAGATGTTTTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGCTGTGTCTGGAGG TGGAGGGGAAGATGGTCAGTAGGACAGAGGGTAACATTGATGACTCGCTCATTGGTGGAA ATGCCTCCGCTGAAGGGCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCG ATATTGTCATGAACCATCACCTGCAGGAAACCAGCTTCACAAAGGAAGCCTACAAGAAGT ACATCAAAGATTATATGAAGTCAATCAAAGGGAAACTCGAAGAACAGAGACCAGAAAGAG TAAAACCTTTTATGACAGGAGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAA ACTATCAGTTCTTTATTGGTGAAAACATGAATCCAGACGGCATGGTTGCTCTGCTGGACT ACCGTGAGGATGGTGTGACTCCATATATGATTTTCTTTAAGGATGGCTTAGAAATGGAAA AATGTTAACAAATTTGGCTGTTGGGATCGGATCTATCACCCGTCGTCATAACTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGAGCGCCGCTCCGGCTGCACCGCGCTCGCTCTGAGCTCCCGGTTCCTGCTAAGCTAGC GCCGCCGTCGTCTCCCTCCAGCCGCCATCATGATCATCTACCGGGACCTCATCAGCCATG ATGAGATGTTTTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGCTGTGTCTGGAGG TGGAGGGGAAGATGGTCAGTAGGACAGAGGGTAACATTGATGACTCGCTCATTGGTGGAA ATGCCTCCGCTGAAGGGCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCG ATATTGTCATGAACCATCACCTGCAGGAAACCAGCTTCACAAAGGAAGCCTACAAGAAGT ACATCAAAGATTATATGAAGTCAATCAAAGGGAAACTCGAAGAACAGAGACCAGAAAGAG TAAAACCTTTTATGACAGGAGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAA ACTATCAGTTCTTTATTGGTGAAAACATGAATCCAGACGGCATGGTTGCTCTGCTGGACT ACCGTGAGGATGGTGTGACTCCATATATGATTTTCTTTAAGGATGGCTTAGAAATGGAAA AATGTTAACAAATTTGGCTGTTGGGATCGGATCTATCACCCGTCGTCATAACTGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 1-121, gnl|bosTau2|chr12 (5699501-5699621) | |
| 1-121, gnl|canFam2|chr22 (8654885-8654762) | |
| 1-121, gnl|canFam2|chr22 (8654882-8654740) | |
| 1-121, gnl|canFam2|chr22 (8654881-8654793) | |
| 1-121, gnl|canFam2|chr22 (8654880-8654741) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6186-6317) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6189-6338) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6189-6275) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6191-6337) | |
| 1-121, gnl|echTel1|scaffold_155415 (2961-3102) | |
| 1-121, gnl|echTel1|scaffold_155415 (2961-3050) | |
| 1-121, gnl|echTel1|scaffold_155415 (2963-3102) | |
| 1-121, gnl|echTel1|scaffold_315971 (46721-46837) | |
| 1-121, gnl|hg17|chr10 (59642777-59642870) | |
| 1-121, gnl|hg17|chr12 (9200268-9200391) | |
| 1-121, gnl|Hg17|chr13 (44813293-44813173) | |
| 1-121, gnl|hg17|chr2 (48772120-48772272) | |
| 1-121, gnl|hg17|chrX (14756218-14756368) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9388-9265) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9385-9244) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9385-9296) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9383-9231) | |
| 1-121, gnl|Mm7|chr14 (70525706-70525810) | |
| 1-121, gnl|mm7|chr6 (99966379-99966486) | |
| 1-121, gnl|mm7|chr6 (99966382-99966507) | |
| 1-121, gnl|mm7|chr6 (99966382-99966455) | |
| 1-121, gnl|mm7|chr6 (99966384-99966511) | |
| 1-121, gnl|monDom2|scaffold_35 (25496820-25496945) | |
| 1-121, gnl|monDom2|scaffold_35 (25496823-25496951) | |
| 1-121, gnl|monDom2|scaffold_35 (18296243-18296152) | |
| 1-121, gnl|monDom2|scaffold_35 (18296241-18296092) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72389-72515) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72392-72484) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72394-72544) | |
| 1-121, gnl|panTro1|chr12 (50842258-50842411) | |
| 1-121, gnl|panTro1|chr8 (60459596-60459689) | |
| 1-121, gnl|panTro1|chrUn_random (57899579-57899456) | |
| 1-121, gnl|panTro1|chrX_random (24607386-24607513) | |
| 1-121, gnl|rheMac2|chr11 (9302064-9302192) | |
| 1-121, gnl|rheMac2|chr9 (112870342-112870236) | |
| 1-121, gnl|rheMac2|chr9 (79113599-79113506) | |
| 1-121, gnl|rheMac2|chrX (12718653-12718798) | |
| 1-121, gnl|rn3|chr1 (19563523-19563417) | |
| 1-121, gnl|rn3|chr1 (19563520-19563448) | |
| 1-121, gnl|rn3|chr1 (19563518-19563395) | |
| 1-121, gnl|rn3|chr7 (136232499-136232623) | |
| 284-656, gnl|bosTau2|chr10 (45753393-45753022) | |
| 284-656, gnl|Mm7|chr6 (99966214-99965856) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-121, gnl|bosTau2|chr12 (5699501-5699621) | |
| 1-121, gnl|canFam2|chr22 (8654885-8654762) | |
| 1-121, gnl|canFam2|chr22 (8654882-8654740) | |
| 1-121, gnl|canFam2|chr22 (8654881-8654793) | |
| 1-121, gnl|canFam2|chr22 (8654880-8654741) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6186-6317) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6189-6338) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6189-6275) | |
| 1-121, gnl|dasNov1|scaffold_44318 (6191-6337) | |
| 1-121, gnl|echTel1|scaffold_155415 (2961-3102) | |
| 1-121, gnl|echTel1|scaffold_155415 (2961-3050) | |
| 1-121, gnl|echTel1|scaffold_155415 (2963-3102) | |
| 1-121, gnl|echTel1|scaffold_315971 (46721-46837) | |
| 1-121, gnl|hg17|chr10 (59642777-59642870) | |
| 1-121, gnl|hg17|chr12 (9200268-9200391) | |
| 1-121, gnl|Hg17|chr13 (44813293-44813173) | |
| 1-121, gnl|hg17|chr2 (48772120-48772272) | |
| 1-121, gnl|hg17|chrX (14756218-14756368) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9388-9265) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9385-9244) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9385-9296) | |
| 1-121, gnl|loxAfr1|scaffold_34406 (9383-9231) | |
| 1-121, gnl|Mm7|chr14 (70525706-70525810) | |
| 1-121, gnl|mm7|chr6 (99966379-99966486) | |
| 1-121, gnl|mm7|chr6 (99966382-99966507) | |
| 1-121, gnl|mm7|chr6 (99966382-99966455) | |
| 1-121, gnl|mm7|chr6 (99966384-99966511) | |
| 1-121, gnl|monDom2|scaffold_35 (25496820-25496945) | |
| 1-121, gnl|monDom2|scaffold_35 (25496823-25496951) | |
| 1-121, gnl|monDom2|scaffold_35 (18296243-18296152) | |
| 1-121, gnl|monDom2|scaffold_35 (18296241-18296092) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72389-72515) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72392-72484) | |
| 1-121, gnl|oryCun1|scaffold_208333 (72394-72544) | |
| 1-121, gnl|panTro1|chr12 (50842258-50842411) | |
| 1-121, gnl|panTro1|chr8 (60459596-60459689) | |
| 1-121, gnl|panTro1|chrUn_random (57899579-57899456) | |
| 1-121, gnl|panTro1|chrX_random (24607386-24607513) | |
| 1-121, gnl|rheMac2|chr11 (9302064-9302192) | |
| 1-121, gnl|rheMac2|chr9 (112870342-112870236) | |
| 1-121, gnl|rheMac2|chr9 (79113599-79113506) | |
| 1-121, gnl|rheMac2|chrX (12718653-12718798) | |
| 1-121, gnl|rn3|chr1 (19563523-19563417) | |
| 1-121, gnl|rn3|chr1 (19563520-19563448) | |
| 1-121, gnl|rn3|chr1 (19563518-19563395) | |
| 1-121, gnl|rn3|chr7 (136232499-136232623) | |
| 284-656, gnl|bosTau2|chr10 (45753393-45753022) | |
| 284-656, gnl|Mm7|chr6 (99966214-99965856) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (0.154178) |