rpty616b_m6.y1
|
GAATTCAAAGTGTTCTGGGACAAGCTGAAGAAGTGGATGAGCCTTTTCCTACAGTTCGAT
GCTGACAAATCGGGCACCATGTCCTCCTACGAGCTGCGGAGCGCCCTGAAAGCCGCAGGC
TTCCAGCTCAGCAGCCCCCTCCTGCAGCTGATTGTCCTCAGATATGCGGACCCGGAGCTC
CAGCTGGGCTTCGACGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGATG
TTCCAGGCTCTCAGTACGAAGAACAAGGAGTTCATTCATCTCAACATAAACGAGTTCATC
GTCTTGACAATGAACATTTGAGGCCTCCCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAATTCAAAGTGTTCTGGGACAAGCTGAAGAAGTGGATGAGCCTTTTCCTACAGTTCGAT
GCTGACAAATCGGGCACCATGTCCTCCTACGAGCTGCGGAGCGCCCTGAAAGCCGCAGGC
TTCCAGCTCAGCAGCCCCCTCCTGCAGCTGATTGTCCTCAGATATGCGGACCCGGAGCTC
CAGCTGGGCTTCGACGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGATG
TTCCAGGCTCTCAGTACGAAGAACAAGGAGTTCATTCATCTCAACATAAACGAGTTCATC
GTCTTGACAATGAACATTTGAGGCCTCCCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
135-238, - strand, RNAmicro p=0.997458 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
135-238, - strand, RNAmicro p=0.997458 |
|
113-246, gnl|bosTau2|chr26 (72950-72816) |
|
113-246, gnl|canFam2|chr4 (11618722-11618583) |
|
113-246, gnl|danRer3|chr1 (52681664-52681800) |
|
113-246, gnl|dasNov1|scaffold_49833 (1910-1771) |
|
113-246, gnl|echTel1|scaffold_302423 (8795-8933) |
|
113-246, gnl|fr1|chrUn (150249112-150248988) |
|
113-246, gnl|galGal2|chr3 (36671523-36671662) |
|
113-246, gnl|hg17|chr1 (227237631-227237770) |
|
113-246, gnl|Hg17|chr1 (227237638-227237772) |
|
113-246, gnl|loxAfr1|scaffold_4375 (6966-6828) |
|
113-246, gnl|mm7|chr8 (123203287-123203446) |
|
113-246, gnl|Mm7|chr8 (123203294-123203427) |
|
113-246, gnl|oryCun1|scaffold_198292 (112083-111944) |
|
113-246, gnl|panTro1|chr1 (211085714-211085853) |
|
113-246, gnl|rheMac2|chr1 (226163850-226163711) |
|
113-246, gnl|rn3|chr19 (54798471-54798630) |
|
113-246, gnl|tetNig1|chr18 (9997140-9997016) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
113-246, gnl|bosTau2|chr26 (72950-72816) |
|
113-246, gnl|canFam2|chr4 (11618722-11618583) |
|
113-246, gnl|danRer3|chr1 (52681664-52681800) |
|
113-246, gnl|dasNov1|scaffold_49833 (1910-1771) |
|
113-246, gnl|echTel1|scaffold_302423 (8795-8933) |
|
113-246, gnl|fr1|chrUn (150249112-150248988) |
|
113-246, gnl|galGal2|chr3 (36671523-36671662) |
|
113-246, gnl|hg17|chr1 (227237631-227237770) |
|
113-246, gnl|Hg17|chr1 (227237638-227237772) |
|
113-246, gnl|loxAfr1|scaffold_4375 (6966-6828) |
|
113-246, gnl|mm7|chr8 (123203287-123203446) |
|
113-246, gnl|Mm7|chr8 (123203294-123203427) |
|
113-246, gnl|oryCun1|scaffold_198292 (112083-111944) |
|
113-246, gnl|panTro1|chr1 (211085714-211085853) |
|
113-246, gnl|rheMac2|chr1 (226163850-226163711) |
|
113-246, gnl|rn3|chr19 (54798471-54798630) |
|
113-246, gnl|tetNig1|chr18 (9997140-9997016) |
