Non-Coding RNA Search

rpty634b_b2r154.y1

Sequence:


               
               ctttttagggctgcgcttgcggcatatggaggttcccaggctaggtgttgaatcagaaat
acagtttctggccacagccatagccacagcacagcactgccagattcgagccatgtctgt
gacttacaccacagctcacagcaacgccgatccttaacccactgagcaaggccagggatc
aaacccaaaacctcatggtttctagctggatttgttcccactgcATCACAACAAGAATTC
CTGGGGGGTTTCTTTTTGAGGTGATGAAAATATTCTACAATTGACTGTGGTGATGCTTCT
GCACCTCAGtgaattgtacactttgaatgagtagattgtatgacatatgaattatatttt
aataaaggtattaTCAAAAATAAAATAATTTTTTTAAAAGATGGCTGTAAAAACAAACAA
TCATCAGTCAGAATATCATTTGGTATAAAAGGTATGAAATCAAATGGGTTATTTCAGCAT
ATTATAAAGTAGGAGTATGGCAGGTTGAGTGAAAGGGACTGTAGACAGAAAATACGGTGA
TCCACTGAGAAACCATCATGATACTTTAGTATGAGAAATAAGAGCTTGAGCCAAGACAGT
GTTAGAAATAGCACCAACTTAATGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ctttttagggctgcgcttgcggcatatggaggttcccaggctaggtgttgaatcagaaat
acagtttctggccacagccatagccacagcacagcactgccagattcgagccatgtctgt
gacttacaccacagctcacagcaacgccgatccttaacccactgagcaaggccagggatc
aaacccaaaacctcatggtttctagctggatttgttcccactgcATCACAACAAGAATTC
CTGGGGGGTTTCTTTTTGAGGTGATGAAAATATTCTACAATTGACTGTGGTGATGCTTCT
GCACCTCAGtgaattgtacactttgaatgagtagattgtatgacatatgaattatatttt
aataaaggtattaTCAAAAATAAAATAATTTTTTTAAAAGATGGCTGTAAAAACAAACAA
TCATCAGTCAGAATATCATTTGGTATAAAAGGTATGAAATCAAATGGGTTATTTCAGCAT
ATTATAAAGTAGGAGTATGGCAGGTTGAGTGAAAGGGACTGTAGACAGAAAATACGGTGA
TCCACTGAGAAACCATCATGATACTTTAGTATGAGAAATAAGAGCTTGAGCCAAGACAGT
GTTAGAAATAGCACCAACTTAATGTA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               244-392, gnl|bosTau2|chr14 (39504884-39504736)
               

               
               244-392, gnl|canFam2|chr13 (3484690-3485223)
               

               
               244-392, gnl|canFam2|chr13 (3484733-3485219)
               

               
               244-392, gnl|hg17|chr8 (99354425-99354967)
               

               
               244-392, gnl|Hg17|chr8 (99354799-99354966)
               

               
               244-392, gnl|hg17|chr9 (6881209-6881696)
               

               
               244-392, gnl|Mm7|chr15 (34763066-34763239)
               

               
               244-392, gnl|panTro1|chr11 (6795607-6796097)
               

               
               244-392, gnl|panTro1|chr7 (101641011-101641553)
               

               
               244-392, gnl|rheMac2|chr15 (70256279-70255789)
               

               
               244-392, gnl|rheMac2|chr8 (100815833-100816369)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               244-392, gnl|bosTau2|chr14 (39504884-39504736)
               

               
               244-392, gnl|canFam2|chr13 (3484690-3485223)
               

               
               244-392, gnl|canFam2|chr13 (3484733-3485219)
               

               
               244-392, gnl|hg17|chr8 (99354425-99354967)
               

               
               244-392, gnl|Hg17|chr8 (99354799-99354966)
               

               
               244-392, gnl|hg17|chr9 (6881209-6881696)
               

               
               244-392, gnl|Mm7|chr15 (34763066-34763239)
               

               
               244-392, gnl|panTro1|chr11 (6795607-6796097)
               

               
               244-392, gnl|panTro1|chr7 (101641011-101641553)
               

               
               244-392, gnl|rheMac2|chr15 (70256279-70255789)
               

               
               244-392, gnl|rheMac2|chr8 (100815833-100816369)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pty (0.142714)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	244-392, gnl\|bosTau2\|chr14 (39504884-39504736)
	244-392, gnl\|canFam2\|chr13 (3484690-3485223)
	244-392, gnl\|canFam2\|chr13 (3484733-3485219)
	244-392, gnl\|hg17\|chr8 (99354425-99354967)
	244-392, gnl\|Hg17\|chr8 (99354799-99354966)
	244-392, gnl\|hg17\|chr9 (6881209-6881696)
	244-392, gnl\|Mm7\|chr15 (34763066-34763239)
	244-392, gnl\|panTro1\|chr11 (6795607-6796097)
	244-392, gnl\|panTro1\|chr7 (101641011-101641553)
	244-392, gnl\|rheMac2\|chr15 (70256279-70255789)
	244-392, gnl\|rheMac2\|chr8 (100815833-100816369)