rrec10_o20.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTCTGAACTGTTATCCAAAGTCTAGCGTCATCTGATATCAGAACACTAAGCTCTTATC CAGTTTCTACTTCTCCTCTCCCACTGCTTGGACCTGGACCCAGGCTTGAAGTTTGCAGTG GGCAAGAAGTATGGACAGGATTGCCAAATAACACACAGGGTGCCCAGCTTAATGGTGAAG AGGCAGTGTTCTGTGTGTGGCAGAAAGAATGAAACATATGGTTACCAGAAGCATGGACTT TGGCAGAGAGTGGGCTCCACAACTGAGGCTGTGACGTTGGAAGAAGCATCTTTGTGTGGC CTGGTTGGTTTCCTGTTCCAGGCCATAGATAAATCCTGCCTGTGCAGACATGGACTGATG GATCCACACTAAAAGGTCTCTCCTACTGTTAAAATCATACCTCAGAGCACATGTACTTGG ATGGTTTGTGGTAGTGGTGCCCTCATATATAAAAGACTTTTGCATGATAAAATTTTTTCA ATGAACAGTAGATGAATCACAGAAGTAATTTTTTACTGAACTTGCTTCAATAACATCTAA GTGGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTCTGAACTGTTATCCAAAGTCTAGCGTCATCTGATATCAGAACACTAAGCTCTTATC CAGTTTCTACTTCTCCTCTCCCACTGCTTGGACCTGGACCCAGGCTTGAAGTTTGCAGTG GGCAAGAAGTATGGACAGGATTGCCAAATAACACACAGGGTGCCCAGCTTAATGGTGAAG AGGCAGTGTTCTGTGTGTGGCAGAAAGAATGAAACATATGGTTACCAGAAGCATGGACTT TGGCAGAGAGTGGGCTCCACAACTGAGGCTGTGACGTTGGAAGAAGCATCTTTGTGTGGC CTGGTTGGTTTCCTGTTCCAGGCCATAGATAAATCCTGCCTGTGCAGACATGGACTGATG GATCCACACTAAAAGGTCTCTCCTACTGTTAAAATCATACCTCAGAGCACATGTACTTGG ATGGTTTGTGGTAGTGGTGCCCTCATATATAAAAGACTTTTGCATGATAAAATTTTTTCA ATGAACAGTAGATGAATCACAGAAGTAATTTTTTACTGAACTTGCTTCAATAACATCTAA GTGGGAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 62-179, + strand, RNAz p=0.820131 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 62-179, + strand, RNAz p=0.820131 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 12-179, gnl|bosTau2|chr14 (13815251-13815417) | |
| 12-179, gnl|Hg17|chr8 (103579425-103579263) | |
| 12-179, gnl|Mm7|chr15 (38270880-38270731) | |
| 252-547, gnl|bosTau2|chr14 (13837847-13838155) | |
| 252-547, gnl|Hg17|chr13 (67799035-67798776) | |
| 252-547, gnl|Mm7|chr15 (38227314-38227061) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-179, gnl|bosTau2|chr14 (13815251-13815417) | |
| 12-179, gnl|Hg17|chr8 (103579425-103579263) | |
| 12-179, gnl|Mm7|chr15 (38270880-38270731) | |
| 252-547, gnl|bosTau2|chr14 (13837847-13838155) | |
| 252-547, gnl|Hg17|chr13 (67799035-67798776) | |
| 252-547, gnl|Mm7|chr15 (38227314-38227061) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| rec (0.17307) |