Non-Coding RNA Search

rrec16_m14.y1

Sequence:


               
               AGCTGTTTAGTAAGCCAGGTAAAGAATGATAATCTCCTTTAAAGATAGGGTATTCTGTAG
ATGGAAAGAAGTAGATATTACTGAAAGCAGTAAAGTTATTCTAAGAATTGATCGGGTACA
AAGTCTCCATTAGTTTTAGGTGTTTTGAAGCCATTGGTGACTTAAAAGTACTTTTTCAGC
TGGCATTTAAGTTAGTGAGTATGTGAGGAATTAGAGGCAGGTAGTATAGACAAATCATAA
GGAGAGAAGTAGAAGCAAATCTTTTTTTATCTTCTTTCCATAAGTAGCTTAGACTTGAAG
CATATAAGGTACTTGAAACATAGCTTGGCTCATAGTAATTAATCTATTAAGTGTTAAAGA
ATTTTAggagttcccatcctggctcagtggttaacgaacctgactaataaccataaggtt
gcgagttcgatccttggactcactcagtgggttaaggatcTGGTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTGTTTAGTAAGCCAGGTAAAGAATGATAATCTCCTTTAAAGATAGGGTATTCTGTAG
ATGGAAAGAAGTAGATATTACTGAAAGCAGTAAAGTTATTCTAAGAATTGATCGGGTACA
AAGTCTCCATTAGTTTTAGGTGTTTTGAAGCCATTGGTGACTTAAAAGTACTTTTTCAGC
TGGCATTTAAGTTAGTGAGTATGTGAGGAATTAGAGGCAGGTAGTATAGACAAATCATAA
GGAGAGAAGTAGAAGCAAATCTTTTTTTATCTTCTTTCCATAAGTAGCTTAGACTTGAAG
CATATAAGGTACTTGAAACATAGCTTGGCTCATAGTAATTAATCTATTAAGTGTTAAAGA
ATTTTAggagttcccatcctggctcagtggttaacgaacctgactaataaccataaggtt
gcgagttcgatccttggactcactcagtgggttaaggatcTGGTGGGG

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               3-233, gnl|bosTau2|chrX (41480466-41480706)
               

               
               3-233, gnl|canFam2|chr3 (75559767-75559527)
               

               
               3-233, gnl|dasNov1|scaffold_89402 (4311-4526)
               

               
               3-233, gnl|hg17|chr4 (39578279-39578532)
               

               
               3-233, gnl|Hg17|chr4 (39578383-39578623)
               

               
               3-233, gnl|loxAfr1|scaffold_10708 (31477-31221)
               

               
               3-233, gnl|panTro1|chr3 (42273985-42274242)
               

               
               3-233, gnl|rheMac2|chr5 (34758645-34758898)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-233, gnl|bosTau2|chrX (41480466-41480706)
               

               
               3-233, gnl|canFam2|chr3 (75559767-75559527)
               

               
               3-233, gnl|dasNov1|scaffold_89402 (4311-4526)
               

               
               3-233, gnl|hg17|chr4 (39578279-39578532)
               

               
               3-233, gnl|Hg17|chr4 (39578383-39578623)
               

               
               3-233, gnl|loxAfr1|scaffold_10708 (31477-31221)
               

               
               3-233, gnl|panTro1|chr3 (42273985-42274242)
               

               
               3-233, gnl|rheMac2|chr5 (34758645-34758898)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               rec (0.17307)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)

	3-233, gnl\|bosTau2\|chrX (41480466-41480706)
	3-233, gnl\|canFam2\|chr3 (75559767-75559527)
	3-233, gnl\|dasNov1\|scaffold_89402 (4311-4526)
	3-233, gnl\|hg17\|chr4 (39578279-39578532)
	3-233, gnl\|Hg17\|chr4 (39578383-39578623)
	3-233, gnl\|loxAfr1\|scaffold_10708 (31477-31221)
	3-233, gnl\|panTro1\|chr3 (42273985-42274242)
	3-233, gnl\|rheMac2\|chr5 (34758645-34758898)