Non-Coding RNA Search

rrec21_j9.y1

Sequence:


               
               CTCGTGCCGTAAAATTGTCATGGGGAGCAGATCCCCAGTGGTGGAGATTTCTACTGTAGA
ATATTTGTGGGCCAAAAGATGGTTGCTTTATAATTTTAACAAATCATCATCTTTTAGTGG
CATCCTTGTTTCATGTCTTCTCAAGCTTTCTTTACTAAGGCATTCAGCTTGTGGCACAGA
TTTATCCCACTAGCTTGTGGGGTGGCACGAGTGATAAAGATCTTGAATTTGGATTGAGAA
GTTTCCTATCTTTACACTGTTGAGGAAGTCATTTTTTTTTTCTTTTTTTTTTTTTTTTAG
CTCAAGAAATGGTATCTCATGGGCTTGGGAAATCCTGTTAGCATGCATAATAATGTGGTA
ACTTTGTCGATCCATTTTATTTTTTTAAATAAATATATGATCTGAAAGCCAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGTGCCGTAAAATTGTCATGGGGAGCAGATCCCCAGTGGTGGAGATTTCTACTGTAGA
ATATTTGTGGGCCAAAAGATGGTTGCTTTATAATTTTAACAAATCATCATCTTTTAGTGG
CATCCTTGTTTCATGTCTTCTCAAGCTTTCTTTACTAAGGCATTCAGCTTGTGGCACAGA
TTTATCCCACTAGCTTGTGGGGTGGCACGAGTGATAAAGATCTTGAATTTGGATTGAGAA
GTTTCCTATCTTTACACTGTTGAGGAAGTCATTTTTTTTTTCTTTTTTTTTTTTTTTTAG
CTCAAGAAATGGTATCTCATGGGCTTGGGAAATCCTGTTAGCATGCATAATAATGTGGTA
ACTTTGTCGATCCATTTTATTTTTTTAAATAAATATATGATCTGAAAGCCAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               9-411, gnl|bosTau2|chr3 (28538128-28537744)
               

               
               9-411, gnl|canFam2|chr6 (43899432-43899044)
               

               
               9-411, gnl|dasNov1|scaffold_23471 (41200-41588)
               

               
               9-411, gnl|echTel1|scaffold_277850 (1637-1248)
               

               
               9-411, gnl|galGal2|chr32 (89889-90283)
               

               
               9-411, gnl|hg17|chr1 (111439100-111439492)
               

               
               9-411, gnl|Hg17|chr1 (111439248-111439653)
               

               
               9-411, gnl|loxAfr1|scaffold_46824 (12826-12445)
               

               
               9-411, gnl|mm7|chr3 (106321788-106321412)
               

               
               9-411, gnl|Mm7|chr3 (106321647-106321268)
               

               
               9-411, gnl|monDom2|scaffold_0 (4680028-4679634)
               

               
               9-411, gnl|oryCun1|scaffold_207810 (132991-132596)
               

               
               9-411, gnl|panTro1|chr1_random (5459855-5460261)
               

               
               9-411, gnl|rheMac2|chr1 (114222188-114222581)
               

               
               9-411, gnl|rn3|chr2 (201765191-201764814)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-411, gnl|bosTau2|chr3 (28538128-28537744)
               

               
               9-411, gnl|canFam2|chr6 (43899432-43899044)
               

               
               9-411, gnl|dasNov1|scaffold_23471 (41200-41588)
               

               
               9-411, gnl|echTel1|scaffold_277850 (1637-1248)
               

               
               9-411, gnl|galGal2|chr32 (89889-90283)
               

               
               9-411, gnl|hg17|chr1 (111439100-111439492)
               

               
               9-411, gnl|Hg17|chr1 (111439248-111439653)
               

               
               9-411, gnl|loxAfr1|scaffold_46824 (12826-12445)
               

               
               9-411, gnl|mm7|chr3 (106321788-106321412)
               

               
               9-411, gnl|Mm7|chr3 (106321647-106321268)
               

               
               9-411, gnl|monDom2|scaffold_0 (4680028-4679634)
               

               
               9-411, gnl|oryCun1|scaffold_207810 (132991-132596)
               

               
               9-411, gnl|panTro1|chr1_random (5459855-5460261)
               

               
               9-411, gnl|rheMac2|chr1 (114222188-114222581)
               

               
               9-411, gnl|rn3|chr2 (201765191-201764814)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               rec (0.17307)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)

	9-411, gnl\|bosTau2\|chr3 (28538128-28537744)
	9-411, gnl\|canFam2\|chr6 (43899432-43899044)
	9-411, gnl\|dasNov1\|scaffold_23471 (41200-41588)
	9-411, gnl\|echTel1\|scaffold_277850 (1637-1248)
	9-411, gnl\|galGal2\|chr32 (89889-90283)
	9-411, gnl\|hg17\|chr1 (111439100-111439492)
	9-411, gnl\|Hg17\|chr1 (111439248-111439653)
	9-411, gnl\|loxAfr1\|scaffold_46824 (12826-12445)
	9-411, gnl\|mm7\|chr3 (106321788-106321412)
	9-411, gnl\|Mm7\|chr3 (106321647-106321268)
	9-411, gnl\|monDom2\|scaffold_0 (4680028-4679634)
	9-411, gnl\|oryCun1\|scaffold_207810 (132991-132596)
	9-411, gnl\|panTro1\|chr1_random (5459855-5460261)
	9-411, gnl\|rheMac2\|chr1 (114222188-114222581)
	9-411, gnl\|rn3\|chr2 (201765191-201764814)