Non-Coding RNA Search

rrec24_i14.y1

Sequence:


               
               TTTTTTTTTTTTTTTTTGAATTAGGTTCATCCTGAGTAGAGGAACTTTGGGTGACCGATG
GTTCTGGGCTTCTTCTCCCAGGAGATGGAGATTTCCGGGACCTTTTCCGATCCACATCTC
TTTCTCTGCGTTTTTCTCGGTCTCTACTTCGTGACTCCATGCCACCATCATAAGAACGTC
CTCTTCTTGAATGCTCATAGTCTGACCTGCTATGATCAAAGTAATCTCTATCCCGAGGGG
ATCTTTCTTGCTCTGGATATCTGTCTTCTGGAGAGGAGGTCCTCTGATATGAATTATAGT
TTTCCCTTCTGTCATGGCTAGAAGAATGCTTTATTTGTGCCACACTACTTTTCATTTTCG
CCCGTTGATCTGATAAATCAAAAACTCCTTAATCTGGTCCAAATAACAAGTACTGAATAG
ATTAATTCCTTGACAGTTTACTTTTCCTGTCTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTGAATTAGGTTCATCCTGAGTAGAGGAACTTTGGGTGACCGATG
GTTCTGGGCTTCTTCTCCCAGGAGATGGAGATTTCCGGGACCTTTTCCGATCCACATCTC
TTTCTCTGCGTTTTTCTCGGTCTCTACTTCGTGACTCCATGCCACCATCATAAGAACGTC
CTCTTCTTGAATGCTCATAGTCTGACCTGCTATGATCAAAGTAATCTCTATCCCGAGGGG
ATCTTTCTTGCTCTGGATATCTGTCTTCTGGAGAGGAGGTCCTCTGATATGAATTATAGT
TTTCCCTTCTGTCATGGCTAGAAGAATGCTTTATTTGTGCCACACTACTTTTCATTTTCG
CCCGTTGATCTGATAAATCAAAAACTCCTTAATCTGGTCCAAATAACAAGTACTGAATAG
ATTAATTCCTTGACAGTTTACTTTTCCTGTCTGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8BTT7_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8BTT7_MOUSE

Aligned organism(s): 17 entry(ies)

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Aligned organism(s): 17 entry(ies)

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               150-262, gnl|bosTau2|chr2 (8300706-8300818)
               

               
               150-262, gnl|canFam2|chr36 (26416915-26417107)
               

               
               150-262, gnl|echTel1|scaffold_224740 (13092-12904)
               

               
               150-262, gnl|galGal2|chr7 (15584964-15584753)
               

               
               150-262, gnl|hg17|chr2 (180676900-180677096)
               

               
               150-262, gnl|Hg17|chr2 (180676928-180677040)
               

               
               150-262, gnl|loxAfr1|scaffold_14961 (63049-63249)
               

               
               150-262, gnl|mm7|chr2 (77775123-77775312)
               

               
               150-262, gnl|Mm7|chr2 (77775151-77775263)
               

               
               150-262, gnl|monDom2|scaffold_2 (81197437-81197625)
               

               
               150-262, gnl|oryCun1|scaffold_196210 (14158-14352)
               

               
               150-262, gnl|panTro1|chr13 (70467420-70467616)
               

               
               150-262, gnl|rheMac2|chr12 (43618139-43618335)
               

               
               150-262, gnl|rn3|chr3 (60492001-60492203)
               


               
               329-455, gnl|bosTau2|chr2 (8307214-8307341)
               

               
               329-455, gnl|Hg17|chr2 (180683548-180683679)
               

               
               329-455, gnl|Mm7|chr2 (77780309-77780430)

Aligned organism(s): 17 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-262, gnl|bosTau2|chr2 (8300706-8300818)
               

               
               150-262, gnl|canFam2|chr36 (26416915-26417107)
               

               
               150-262, gnl|echTel1|scaffold_224740 (13092-12904)
               

               
               150-262, gnl|galGal2|chr7 (15584964-15584753)
               

               
               150-262, gnl|hg17|chr2 (180676900-180677096)
               

               
               150-262, gnl|Hg17|chr2 (180676928-180677040)
               

               
               150-262, gnl|loxAfr1|scaffold_14961 (63049-63249)
               

               
               150-262, gnl|mm7|chr2 (77775123-77775312)
               

               
               150-262, gnl|Mm7|chr2 (77775151-77775263)
               

               
               150-262, gnl|monDom2|scaffold_2 (81197437-81197625)
               

               
               150-262, gnl|oryCun1|scaffold_196210 (14158-14352)
               

               
               150-262, gnl|panTro1|chr13 (70467420-70467616)
               

               
               150-262, gnl|rheMac2|chr12 (43618139-43618335)
               

               
               150-262, gnl|rn3|chr3 (60492001-60492203)
               


               
               329-455, gnl|bosTau2|chr2 (8307214-8307341)
               

               
               329-455, gnl|Hg17|chr2 (180683548-180683679)
               

               
               329-455, gnl|Mm7|chr2 (77780309-77780430)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               rec (0.17307)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)

	150-262, gnl\|bosTau2\|chr2 (8300706-8300818)
	150-262, gnl\|canFam2\|chr36 (26416915-26417107)
	150-262, gnl\|echTel1\|scaffold_224740 (13092-12904)
	150-262, gnl\|galGal2\|chr7 (15584964-15584753)
	150-262, gnl\|hg17\|chr2 (180676900-180677096)
	150-262, gnl\|Hg17\|chr2 (180676928-180677040)
	150-262, gnl\|loxAfr1\|scaffold_14961 (63049-63249)
	150-262, gnl\|mm7\|chr2 (77775123-77775312)
	150-262, gnl\|Mm7\|chr2 (77775151-77775263)
	150-262, gnl\|monDom2\|scaffold_2 (81197437-81197625)
	150-262, gnl\|oryCun1\|scaffold_196210 (14158-14352)
	150-262, gnl\|panTro1\|chr13 (70467420-70467616)
	150-262, gnl\|rheMac2\|chr12 (43618139-43618335)
	150-262, gnl\|rn3\|chr3 (60492001-60492203)

	329-455, gnl\|bosTau2\|chr2 (8307214-8307341)
	329-455, gnl\|Hg17\|chr2 (180683548-180683679)
	329-455, gnl\|Mm7\|chr2 (77780309-77780430)