Non-Coding RNA Search

rret01_b21.y1

Sequence:


               
               GAGTTTCCTAATGCTTGTTCTATAAGAACGAGATTAGTTAATAGTAATTTCCCAAATGGA
ATTATTTATATAATTGCCATTCCTAGTGTCCTTAGCATATTTTTCTTAAGGTTTATATCT
TTTTGTTTGTTTTATGTTTAAATAGGAGCACCTAGGCTAAAATGTCAAGAACTCTTGAAT
TATATCATGGATACAGTGAGAGATTCATCTAACAATCCCATTTATGGAGCTGATTATAGC
AATATATTGCTGAAGGACATTCTTTCAGTGAGGAAATACTGGTGTGAAATATCTCAGCAA
CAGTGGCGAGGTATGTTTTGGATTTTGTTGTTTTTGACTTTTCCCTTGTGAAATGAAATT
TTACCAAAAGAGCTGTCAAGAGTCTATTTATAGCTGCCAAATGACCTCACAGTTTAACAG
TATCTTAGTAAAATTAAATGATTATAGAATCTGATGCTTAGTTTTCATGTACTTTGTACC
TCCTAAATTATTATAACTAATAATGTATTAGGTGCCAGCTATCAGAACTGAAATTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTTTCCTAATGCTTGTTCTATAAGAACGAGATTAGTTAATAGTAATTTCCCAAATGGA
ATTATTTATATAATTGCCATTCCTAGTGTCCTTAGCATATTTTTCTTAAGGTTTATATCT
TTTTGTTTGTTTTATGTTTAAATAGGAGCACCTAGGCTAAAATGTCAAGAACTCTTGAAT
TATATCATGGATACAGTGAGAGATTCATCTAACAATCCCATTTATGGAGCTGATTATAGC
AATATATTGCTGAAGGACATTCTTTCAGTGAGGAAATACTGGTGTGAAATATCTCAGCAA
CAGTGGCGAGGTATGTTTTGGATTTTGTTGTTTTTGACTTTTCCCTTGTGAAATGAAATT
TTACCAAAAGAGCTGTCAAGAGTCTATTTATAGCTGCCAAATGACCTCACAGTTTAACAG
TATCTTAGTAAAATTAAATGATTATAGAATCTGATGCTTAGTTTTCATGTACTTTGTACC
TCCTAAATTATTATAACTAATAATGTATTAGGTGCCAGCTATCAGAACTGAAATTAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-535, gnl|bosTau2|chr15 (6294083-6293621)
               

               
               65-535, gnl|Hg17|chr11 (107611499-107611998)
               

               
               65-535, gnl|Mm7|chr9 (53506120-53505176)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-535, gnl|bosTau2|chr15 (6294083-6293621)
               

               
               65-535, gnl|Hg17|chr11 (107611499-107611998)
               

               
               65-535, gnl|Mm7|chr9 (53506120-53505176)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	65-535, gnl\|bosTau2\|chr15 (6294083-6293621)
	65-535, gnl\|Hg17\|chr11 (107611499-107611998)
	65-535, gnl\|Mm7\|chr9 (53506120-53505176)