rret03_c10.y1
|
AACAGATACACACACACATTTACATATACACACACACAAAGACACCAAAATATTAGCATG
ACTACATACAATACTGGCTGTAAAACAGGATTGAAATACTATAGACATACACTTTTGAAG
AGGAGTCTATTCGGCTTATCTCATAATGTAGTTCTAATGATTTTTAATAATGTATGGTTT
CTGTATGTCTGAATGTAAAAATTAATGTGTATGTAAACTGTTAGGTAGCAATACCCACTA
TATATATAAACTCTTAGGTAGCAAGTGCCCAATATATATACTCACTTCTATTTTATTTAT
CTTGGGTAGAACTATTCATATTTATGTAACAAAAATCAACTTAATTTTACAGTCATTAAA
GAGCAAGTATGAAAGAATTTAATAGCTATAAAGCAACCTTGGAGCAAAAGTGGGTTATTG
AATTTAAGCTCACAGTATAAATGAGCTATTTTGGCACTCATTAGATTAAAATGATTAAAT
TGCTTCTCTCTTGTGTCTCGTATTCACATAGGAAGTTTTGTACTTTTGCTTAACCACAAA
ATACTTTACCCTCTAGGAGGAAAAAAATAATAATCCCATAGCTCTTTAATGAAAGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACAGATACACACACACATTTACATATACACACACACAAAGACACCAAAATATTAGCATG
ACTACATACAATACTGGCTGTAAAACAGGATTGAAATACTATAGACATACACTTTTGAAG
AGGAGTCTATTCGGCTTATCTCATAATGTAGTTCTAATGATTTTTAATAATGTATGGTTT
CTGTATGTCTGAATGTAAAAATTAATGTGTATGTAAACTGTTAGGTAGCAATACCCACTA
TATATATAAACTCTTAGGTAGCAAGTGCCCAATATATATACTCACTTCTATTTTATTTAT
CTTGGGTAGAACTATTCATATTTATGTAACAAAAATCAACTTAATTTTACAGTCATTAAA
GAGCAAGTATGAAAGAATTTAATAGCTATAAAGCAACCTTGGAGCAAAAGTGGGTTATTG
AATTTAAGCTCACAGTATAAATGAGCTATTTTGGCACTCATTAGATTAAAATGATTAAAT
TGCTTCTCTCTTGTGTCTCGTATTCACATAGGAAGTTTTGTACTTTTGCTTAACCACAAA
ATACTTTACCCTCTAGGAGGAAAAAAATAATAATCCCATAGCTCTTTAATGAAAGG
|
|
16-228, gnl|bosTau2|chr29 (9156527-9156316) |
|
16-228, gnl|Hg17|chr7 (82873796-82873590) |
|
16-228, gnl|Mm7|chr5 (13537944-13538134) |
| |
|
243-596, gnl|bosTau2|chr29 (9156334-9155979) |
|
243-596, gnl|canFam2|chr18 (26070259-26070887) |
|
243-596, gnl|dasNov1|scaffold_178001 (1715-1100) |
|
243-596, gnl|echTel1|scaffold_89314 (1788-1153) |
|
243-596, gnl|hg17|chr7 (82873041-82873663) |
|
243-596, gnl|Hg17|chr7 (82873608-82873248) |
|
243-596, gnl|loxAfr1|scaffold_80563 (8516-7888) |
|
243-596, gnl|mm7|chr5 (13538658-13538062) |
|
243-596, gnl|Mm7|chr5 (13538114-13538481) |
|
243-596, gnl|monDom2|scaffold_30 (19794721-19794082) |
|
243-596, gnl|oryCun1|scaffold_189289 (7095-6470) |
|
243-596, gnl|panTro1|chr6 (84340634-84341255) |
|
243-596, gnl|rheMac2|chr3 (133662678-133662051) |
|
243-596, gnl|rn3|chr4 (16745243-16745824) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
16-228, gnl|bosTau2|chr29 (9156527-9156316) |
|
16-228, gnl|Hg17|chr7 (82873796-82873590) |
|
16-228, gnl|Mm7|chr5 (13537944-13538134) |
| |
|
243-596, gnl|bosTau2|chr29 (9156334-9155979) |
|
243-596, gnl|canFam2|chr18 (26070259-26070887) |
|
243-596, gnl|dasNov1|scaffold_178001 (1715-1100) |
|
243-596, gnl|echTel1|scaffold_89314 (1788-1153) |
|
243-596, gnl|hg17|chr7 (82873041-82873663) |
|
243-596, gnl|Hg17|chr7 (82873608-82873248) |
|
243-596, gnl|loxAfr1|scaffold_80563 (8516-7888) |
|
243-596, gnl|mm7|chr5 (13538658-13538062) |
|
243-596, gnl|Mm7|chr5 (13538114-13538481) |
|
243-596, gnl|monDom2|scaffold_30 (19794721-19794082) |
|
243-596, gnl|oryCun1|scaffold_189289 (7095-6470) |
|
243-596, gnl|panTro1|chr6 (84340634-84341255) |
|
243-596, gnl|rheMac2|chr3 (133662678-133662051) |
|
243-596, gnl|rn3|chr4 (16745243-16745824) |