Non-Coding RNA Search

rret03_c6.y1

Sequence:


               
               TGGTTGTCAACCTGCCCTGTTCAGTGACACTGCAGCCAGGTCCTGATGATACAGGAAAGG
CCTGTGGCATTGACTTTGAAGTGAAGAGTTTCTGTGCTGAAAACCTGGAGGAGAAAGTCT
CCAAGAAAGATTCCGTGCGGCTGGTGATTCGGAAAATACAGTTTGCACCTGTGGAGCCAG
GCCCTGGCCCCTGGGCCCAGACCGTTCGCCGTTTCCTTCTGTCAGCTCAGCCCCTACAAC
TCCAGGCCTGGATGGACAGGGAGGTTCACTACCATGGCAAACCAATCTCTGTCAATGTTT
CCATCAACAACTCCACCAACAAGGTCATCAAAAAAATCAAGATCTCTGTTGACCAGATCA
CAGATGTTGTCCTGTATTCACTAGACAAGTACACCAAGACTGTGTTCATTCAGGAGTTCA
CGGAGACTATAGCTGCTAACTCCACCTTCTCCAAGAGCTTTGAAGTAACCCCACTCCTGG
CTGACAACTGCGAGAAACAGGGCCTGGCGCTGGATGGCAAACTCAAGCATGGTGACACCA
ACCTGGCCTCTAGCACAATTCTTCGGCCAGGAATGGATAAGGAGCTGCTGGGGATCTTGG
TGTCCTACAAAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTTGTCAACCTGCCCTGTTCAGTGACACTGCAGCCAGGTCCTGATGATACAGGAAAGG
CCTGTGGCATTGACTTTGAAGTGAAGAGTTTCTGTGCTGAAAACCTGGAGGAGAAAGTCT
CCAAGAAAGATTCCGTGCGGCTGGTGATTCGGAAAATACAGTTTGCACCTGTGGAGCCAG
GCCCTGGCCCCTGGGCCCAGACCGTTCGCCGTTTCCTTCTGTCAGCTCAGCCCCTACAAC
TCCAGGCCTGGATGGACAGGGAGGTTCACTACCATGGCAAACCAATCTCTGTCAATGTTT
CCATCAACAACTCCACCAACAAGGTCATCAAAAAAATCAAGATCTCTGTTGACCAGATCA
CAGATGTTGTCCTGTATTCACTAGACAAGTACACCAAGACTGTGTTCATTCAGGAGTTCA
CGGAGACTATAGCTGCTAACTCCACCTTCTCCAAGAGCTTTGAAGTAACCCCACTCCTGG
CTGACAACTGCGAGAAACAGGGCCTGGCGCTGGATGGCAAACTCAAGCATGGTGACACCA
ACCTGGCCTCTAGCACAATTCTTCGGCCAGGAATGGATAAGGAGCTGCTGGGGATCTTGG
TGTCCTACAAAGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47523750|ref|NP_999510.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47523750|ref|NP_999510.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               128-266, gnl|bosTau2|chrX (20619686-20619548)
               

               
               128-266, gnl|Hg17|chrX (69280265-69280403)
               

               
               128-266, gnl|Mm7|chrX (95940853-95940991)
               


               
               422-559, gnl|bosTau2|chrX (20618562-20618425)
               

               
               422-559, gnl|Hg17|chrX (69281375-69281512)
               

               
               422-559, gnl|Mm7|chrX (95941957-95942094)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-266, gnl|bosTau2|chrX (20619686-20619548)
               

               
               128-266, gnl|Hg17|chrX (69280265-69280403)
               

               
               128-266, gnl|Mm7|chrX (95940853-95940991)
               


               
               422-559, gnl|bosTau2|chrX (20618562-20618425)
               

               
               422-559, gnl|Hg17|chrX (69281375-69281512)
               

               
               422-559, gnl|Mm7|chrX (95941957-95942094)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	128-266, gnl\|bosTau2\|chrX (20619686-20619548)
	128-266, gnl\|Hg17\|chrX (69280265-69280403)
	128-266, gnl\|Mm7\|chrX (95940853-95940991)

	422-559, gnl\|bosTau2\|chrX (20618562-20618425)
	422-559, gnl\|Hg17\|chrX (69281375-69281512)
	422-559, gnl\|Mm7\|chrX (95941957-95942094)