Non-Coding RNA Search

rret03_g2.y1

Sequence:


               
               TACAATGAAATAAAAGACCAGAGCAAATAAGCCAGCTCACATTGCTATATGGAAAAGGAA
TCTGTAAGGGTCTCAGTAGCAGGTTTTAAAAACATGGGTTATTTGTTATACATACTTCAT
ATTATGCAGTTTCTACTGTTATACCAGGTATGCCTATGTGTAAAAGAAAATCTTATTAAC
TATTCAAAAAATAATGGTCTTCAGGAATAATATGGCAGATCTTTCTTGACCAGCACTGTC
TAGGGGGAATACAATGCAAGTTATCTATGTATTATCAATTTTTTTAATAGTCATGTTAAA
ACGTAAAGAAAACAAACAAACCAAACCCCAATCATTTTAATATGTATTACTCAACCCGGT
ATGTCCAAAATATTATCACTTCAACATACAGCTATGAAATTATTAACAACATATTTACAT
TCAGTTTTTCATGATAAGTCTTTGAATCTGATATATCTCTTACACTTATAGCACAGCACA
ACTTGGATACTGACTTTTCACAGGAAATCTGTATTTAGATTTCAGGACATTTACAGTTAT
AAAAAGTAGACTCAGGAACATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAATGAAATAAAAGACCAGAGCAAATAAGCCAGCTCACATTGCTATATGGAAAAGGAA
TCTGTAAGGGTCTCAGTAGCAGGTTTTAAAAACATGGGTTATTTGTTATACATACTTCAT
ATTATGCAGTTTCTACTGTTATACCAGGTATGCCTATGTGTAAAAGAAAATCTTATTAAC
TATTCAAAAAATAATGGTCTTCAGGAATAATATGGCAGATCTTTCTTGACCAGCACTGTC
TAGGGGGAATACAATGCAAGTTATCTATGTATTATCAATTTTTTTAATAGTCATGTTAAA
ACGTAAAGAAAACAAACAAACCAAACCCCAATCATTTTAATATGTATTACTCAACCCGGT
ATGTCCAAAATATTATCACTTCAACATACAGCTATGAAATTATTAACAACATATTTACAT
TCAGTTTTTCATGATAAGTCTTTGAATCTGATATATCTCTTACACTTATAGCACAGCACA
ACTTGGATACTGACTTTTCACAGGAAATCTGTATTTAGATTTCAGGACATTTACAGTTAT
AAAAAGTAGACTCAGGAACATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-563, gnl|bosTau2|chr4 (32593065-32592639)
               

               
               150-563, gnl|Hg17|chr7 (36795418-36795021)
               

               
               150-563, gnl|Mm7|chr13 (19846341-19846698)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-563, gnl|bosTau2|chr4 (32593065-32592639)
               

               
               150-563, gnl|Hg17|chr7 (36795418-36795021)
               

               
               150-563, gnl|Mm7|chr13 (19846341-19846698)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	150-563, gnl\|bosTau2\|chr4 (32593065-32592639)
	150-563, gnl\|Hg17\|chr7 (36795418-36795021)
	150-563, gnl\|Mm7\|chr13 (19846341-19846698)